Protein–RNA interactions for Protein: P06839

RAD3, General transcription and DNA repair factor IIH helicase subunit XPD, yeastyeast

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RAD3P06839 PMT7YDR307W 1989 nt8.52□□□□□ -1.05
RAD3P06839 BUD20YLR074C 501 nt8.52□□□□□ -1.05
RAD3P06839 YMR253CYMR253C 1245 nt8.52□□□□□ -1.05
RAD3P06839 YPL264CYPL264C 1062 nt8.52□□□□□ -1.05
RAD3P06839 PHB2YGR231C 933 nt8.51□□□□□ -1.05
RAD3P06839 RCR1YBR005W 642 nt8.51□□□□□ -1.05
RAD3P06839 SER2YGR208W 930 nt8.5□□□□□ -1.05
RAD3P06839 ADH3YMR083W 1128 nt8.5□□□□□ -1.05
RAD3P06839 ERR3YMR323W 1314 nt8.5□□□□□ -1.05
RAD3P06839 ERR1YOR393W 1314 nt8.5□□□□□ -1.05
RAD3P06839 ERR2YPL281C 1314 nt8.5□□□□□ -1.05
RAD3P06839 YLR072WYLR072W 2082 nt8.49□□□□□ -1.05
RAD3P06839 CYC3YAL039C 810 nt8.49□□□□□ -1.05
RAD3P06839 YMC2YBR104W 990 nt8.49□□□□□ -1.05
RAD3P06839 YIL108WYIL108W 2091 nt8.49□□□□□ -1.05
RAD3P06839 YKL053WYKL053W 375 nt8.48□□□□□ -1.05
RAD3P06839 HTS1YPR033C 1641 nt8.47□□□□□ -1.05
RAD3P06839 YMR316C-BYMR316C-B 309 nt8.47□□□□□ -1.05
RAD3P06839 GGA2YHR108W 1758 nt8.46□□□□□ -1.05
RAD3P06839 ATO2YNR002C 849 nt8.46□□□□□ -1.06
RAD3P06839 SPE2YOL052C 1191 nt8.46□□□□□ -1.06
RAD3P06839 AFG2YLR397C 2343 nt8.45□□□□□ -1.06
RAD3P06839 YOR343CYOR343C 327 nt8.45□□□□□ -1.06
RAD3P06839 RSC4YKR008W 1878 nt8.45□□□□□ -1.06
RAD3P06839 AMF1YOR378W 1548 nt8.44□□□□□ -1.06
RAD3P06839 RPL12BYDR418W 498 nt8.43□□□□□ -1.06
RAD3P06839 SRP102YKL154W 735 nt8.43□□□□□ -1.06
RAD3P06839 PAU21YOR394W 495 nt8.42□□□□□ -1.06
RAD3P06839 PAU22YPL282C 495 nt8.42□□□□□ -1.06
RAD3P06839 YNL040WYNL040W 1371 nt8.42□□□□□ -1.06
RAD3P06839 SAN1YDR143C 1833 nt8.42□□□□□ -1.06
RAD3P06839 MAS2YHR024C 1449 nt8.41□□□□□ -1.06
RAD3P06839 SBP1YHL034C 885 nt8.41□□□□□ -1.06
RAD3P06839 MOB1YIL106W 945 nt8.41□□□□□ -1.06
RAD3P06839 LEU2YCL018W 1095 nt8.41□□□□□ -1.06
RAD3P06839 AQR1YNL065W 1761 nt8.4□□□□□ -1.06
RAD3P06839 CCR4YAL021C 2514 nt8.4□□□□□ -1.06
RAD3P06839 MRS4YKR052C 915 nt8.4□□□□□ -1.06
RAD3P06839 YER152CYER152C 1332 nt8.39□□□□□ -1.07
RAD3P06839 ENO2YHR174W 1314 nt8.39□□□□□ -1.07
RAD3P06839 TPC1YGR096W 945 nt8.39□□□□□ -1.07
RAD3P06839 LEA1YPL213W 717 nt8.39□□□□□ -1.07
RAD3P06839 snR86snR86 1004 nt8.38□□□□□ -1.07
RAD3P06839 SDS24YBR214W 1584 nt8.38□□□□□ -1.07
RAD3P06839 HXT9YJL219W 1704 nt8.37□□□□□ -1.07
RAD3P06839 YEL034C-AYEL034C-A 603 nt8.36□□□□□ -1.07
RAD3P06839 HRA1HRA1 564 nt8.36□□□□□ -1.07
RAD3P06839 HXT13YEL069C 1695 nt8.36□□□□□ -1.07
RAD3P06839 POB3YML069W 1659 nt8.35□□□□□ -1.07
RAD3P06839 YAL016C-AYAL016C-A 315 nt8.35□□□□□ -1.07
RAD3P06839 YKR012CYKR012C 378 nt8.35□□□□□ -1.07
RAD3P06839 AAC3YBR085W 924 nt8.35□□□□□ -1.07
RAD3P06839 ABP1YCR088W 1779 nt8.35□□□□□ -1.07
RAD3P06839 ENO1YGR254W 1314 nt8.34□□□□□ -1.07
RAD3P06839 YGR210CYGR210C 1236 nt8.34□□□□□ -1.07
RAD3P06839 MAM3YOL060C 2121 nt8.34□□□□□ -1.07
RAD3P06839 ERO1YML130C 1692 nt8.33□□□□□ -1.08
RAD3P06839 VBA3YCL069W 1377 nt8.32□□□□□ -1.08
RAD3P06839 NAM8YHR086W 1572 nt8.31□□□□□ -1.08
RAD3P06839 MSB3YNL293W 1902 nt8.31□□□□□ -1.08
RAD3P06839 GRH1YDR517W 1119 nt8.31□□□□□ -1.08
RAD3P06839 ADE2YOR128C 1716 nt8.31□□□□□ -1.08
RAD3P06839 RRT6YGL146C 936 nt8.29□□□□□ -1.08
RAD3P06839 YLR280CYLR280C 351 nt8.29□□□□□ -1.08
RAD3P06839 YPL108WYPL108W 507 nt8.29□□□□□ -1.08
RAD3P06839 SRP54YPR088C 1626 nt8.29□□□□□ -1.08
RAD3P06839 TGA1tA(UGC)A 73 nt8.28□□□□□ -1.08
RAD3P06839 tA(UGC)EtA(UGC)E 73 nt8.28□□□□□ -1.08
RAD3P06839 tA(UGC)GtA(UGC)G 73 nt8.28□□□□□ -1.08
RAD3P06839 tA(UGC)LtA(UGC)L 73 nt8.28□□□□□ -1.08
RAD3P06839 tA(UGC)OtA(UGC)O 73 nt8.28□□□□□ -1.08
RAD3P06839 REX2YLR059C 810 nt8.28□□□□□ -1.08
RAD3P06839 HIS3YOR202W 663 nt8.28□□□□□ -1.08
RAD3P06839 YOR268CYOR268C 399 nt8.28□□□□□ -1.08
RAD3P06839 WSC4YHL028W 1818 nt8.28□□□□□ -1.08
RAD3P06839 GAS1YMR307W 1680 nt8.27□□□□□ -1.08
RAD3P06839 MRP1YDR347W 966 nt8.26□□□□□ -1.09
RAD3P06839 EDC2YER035W 438 nt8.26□□□□□ -1.09
RAD3P06839 YJL160CYJL160C 864 nt8.26□□□□□ -1.09
RAD3P06839 TMS1YDR105C 1422 nt8.26□□□□□ -1.09
RAD3P06839 PTC6YCR079W 1329 nt8.26□□□□□ -1.09
RAD3P06839 FCP1YMR277W 2199 nt8.24□□□□□ -1.09
RAD3P06839 MFG1YDL233W 1377 nt8.22□□□□□ -1.09
RAD3P06839 YFR020WYFR020W 699 nt8.22□□□□□ -1.09
RAD3P06839 FCY1YPR062W 477 nt8.22□□□□□ -1.09
RAD3P06839 YBL111CYBL111C 2004 nt8.22□□□□□ -1.09
RAD3P06839 YJL009WYJL009W 327 nt8.21□□□□□ -1.1
RAD3P06839 YPT11YNL304W 1254 nt8.21□□□□□ -1.1
RAD3P06839 NDE2YDL085W 1638 nt8.21□□□□□ -1.1
RAD3P06839 CDC13YDL220C 2775 nt8.2□□□□□ -1.1
RAD3P06839 YER137CYER137C 447 nt8.2□□□□□ -1.1
RAD3P06839 MEP1YGR121C 1479 nt8.19□□□□□ -1.1
RAD3P06839 YBR056WYBR056W 1506 nt8.19□□□□□ -1.1
RAD3P06839 YRF1-3YGR296W 5580 nt8.18□□□□□ -1.1
RAD3P06839 YRF1-6YNL339C 5580 nt8.18□□□□□ -1.1
RAD3P06839 YRF1-7YPL283C 5580 nt8.18□□□□□ -1.1
RAD3P06839 SNU66YOR308C 1764 nt8.18□□□□□ -1.1
RAD3P06839 APT1YML022W 564 nt8.17□□□□□ -1.1
RAD3P06839 BNA3YJL060W 1335 nt8.17□□□□□ -1.1
RAD3P06839 MET13YGL125W 1803 nt8.17□□□□□ -1.1
Retrieved 100 of 7,029 protein–RNA pairs in 41.1 ms