Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC21.32■■□□□ 1
GAPDHP04406 MIR3665-201ENST00000578708 105 ntBASIC21.32■■□□□ 1
GAPDHP04406 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
GAPDHP04406 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC21.31■■□□□ 1
GAPDHP04406 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC21.31■■□□□ 1
GAPDHP04406 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
GAPDHP04406 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC21.3■■□□□ 1
GAPDHP04406 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
GAPDHP04406 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
GAPDHP04406 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC21.29■■□□□ 1
GAPDHP04406 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC21.29■■□□□ 1
GAPDHP04406 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
GAPDHP04406 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC21.28■■□□□ 1
GAPDHP04406 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
GAPDHP04406 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC21.28■■□□□ 1
GAPDHP04406 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
GAPDHP04406 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC21.28■■□□□ 1
GAPDHP04406 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC21.27■■□□□ 1
GAPDHP04406 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC21.27■■□□□ 1
GAPDHP04406 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC21.27■■□□□ 1
GAPDHP04406 AL139393.2-201ENST00000608721 2025 ntBASIC21.27■■□□□ 1
GAPDHP04406 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
GAPDHP04406 DUX4L28-201ENST00000623687 678 ntBASIC21.25■□□□□ 0.99
GAPDHP04406 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
GAPDHP04406 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC21.24■□□□□ 0.99
GAPDHP04406 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC21.24■□□□□ 0.99
GAPDHP04406 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
GAPDHP04406 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
GAPDHP04406 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
GAPDHP04406 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
GAPDHP04406 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
GAPDHP04406 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
GAPDHP04406 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
GAPDHP04406 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC21.22■□□□□ 0.99
GAPDHP04406 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GAPDHP04406 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
GAPDHP04406 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
GAPDHP04406 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.21■□□□□ 0.99
GAPDHP04406 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
GAPDHP04406 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
GAPDHP04406 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
GAPDHP04406 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC21.21■□□□□ 0.99
GAPDHP04406 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
GAPDHP04406 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
GAPDHP04406 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
GAPDHP04406 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
GAPDHP04406 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
GAPDHP04406 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.19■□□□□ 0.98
GAPDHP04406 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
GAPDHP04406 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
GAPDHP04406 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.19■□□□□ 0.98
GAPDHP04406 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
GAPDHP04406 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
GAPDHP04406 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC21.17■□□□□ 0.98
GAPDHP04406 AL162393.1-201ENST00000437852 946 ntBASIC21.17■□□□□ 0.98
GAPDHP04406 AC108673.1-201ENST00000510422 1159 ntBASIC21.17■□□□□ 0.98
GAPDHP04406 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
GAPDHP04406 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
GAPDHP04406 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
GAPDHP04406 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
GAPDHP04406 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
GAPDHP04406 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
GAPDHP04406 NRG1-221ENST00000614767 762 ntTSL 5 BASIC21.16■□□□□ 0.98
GAPDHP04406 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
GAPDHP04406 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
GAPDHP04406 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC21.15■□□□□ 0.98
GAPDHP04406 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
GAPDHP04406 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.15■□□□□ 0.98
GAPDHP04406 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
GAPDHP04406 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.14■□□□□ 0.97
GAPDHP04406 AC087741.3-201ENST00000624270 1347 ntBASIC21.13■□□□□ 0.97
GAPDHP04406 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
GAPDHP04406 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
GAPDHP04406 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.12■□□□□ 0.97
GAPDHP04406 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC21.12■□□□□ 0.97
GAPDHP04406 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
GAPDHP04406 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
GAPDHP04406 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC21.11■□□□□ 0.97
GAPDHP04406 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC21.11■□□□□ 0.97
GAPDHP04406 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.11■□□□□ 0.97
GAPDHP04406 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
GAPDHP04406 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
GAPDHP04406 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
GAPDHP04406 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
GAPDHP04406 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
GAPDHP04406 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
GAPDHP04406 AC044849.2-201ENST00000606596 710 ntBASIC21.1■□□□□ 0.97
GAPDHP04406 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC21.1■□□□□ 0.97
GAPDHP04406 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
GAPDHP04406 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
GAPDHP04406 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
GAPDHP04406 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
GAPDHP04406 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
GAPDHP04406 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC21.08■□□□□ 0.97
GAPDHP04406 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC21.08■□□□□ 0.97
GAPDHP04406 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
GAPDHP04406 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
GAPDHP04406 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
GAPDHP04406 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
GAPDHP04406 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 142.6 ms