Protein–RNA interactions for Protein: P03980

Ig heavy chain V region TEPC 1017, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P03980 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
P03980 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
P03980 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
P03980 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
P03980 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
P03980 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
P03980 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
P03980 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.16■□□□□ 0.5
P03980 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC18.16■□□□□ 0.5
P03980 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
P03980 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
P03980 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
P03980 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
P03980 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.14■□□□□ 0.49
P03980 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
P03980 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
P03980 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
P03980 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
P03980 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
P03980 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
P03980 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
P03980 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
P03980 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
P03980 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.12■□□□□ 0.49
P03980 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
P03980 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
P03980 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
P03980 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
P03980 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
P03980 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
P03980 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
P03980 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
P03980 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
P03980 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC18.09■□□□□ 0.49
P03980 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
P03980 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
P03980 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
P03980 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
P03980 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
P03980 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
P03980 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
P03980 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
P03980 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
P03980 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
P03980 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
P03980 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
P03980 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
P03980 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
P03980 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
P03980 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
P03980 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
P03980 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
P03980 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
P03980 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
P03980 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
P03980 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
P03980 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
P03980 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
P03980 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
P03980 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
P03980 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
P03980 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
P03980 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
P03980 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
P03980 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
P03980 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
P03980 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
P03980 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
P03980 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
P03980 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
P03980 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18■□□□□ 0.47
P03980 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
P03980 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
P03980 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC17.99■□□□□ 0.47
P03980 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
P03980 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
P03980 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC17.99■□□□□ 0.47
P03980 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
P03980 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
P03980 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
P03980 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
P03980 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
P03980 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
P03980 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
P03980 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
P03980 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
P03980 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
P03980 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
P03980 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC17.95■□□□□ 0.46
P03980 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
P03980 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC17.95■□□□□ 0.46
P03980 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
P03980 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
P03980 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
P03980 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC17.93■□□□□ 0.46
P03980 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC17.93■□□□□ 0.46
P03980 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
P03980 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC17.93■□□□□ 0.46
P03980 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
P03980 Gm43863-201ENSMUST00000203822 1192 ntBASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms