Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hbb-b1P02088 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Hbb-b1P02088 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Hbb-b1P02088 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hbb-b1P02088 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC16.67■□□□□ 0.26
Hbb-b1P02088 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Hbb-b1P02088 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hbb-b1P02088 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Hbb-b1P02088 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
Hbb-b1P02088 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hbb-b1P02088 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC16.66■□□□□ 0.26
Hbb-b1P02088 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hbb-b1P02088 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Hbb-b1P02088 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hbb-b1P02088 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
Hbb-b1P02088 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hbb-b1P02088 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hbb-b1P02088 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hbb-b1P02088 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hbb-b1P02088 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
Hbb-b1P02088 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Hbb-b1P02088 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hbb-b1P02088 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hbb-b1P02088 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC16.63■□□□□ 0.25
Hbb-b1P02088 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Hbb-b1P02088 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hbb-b1P02088 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hbb-b1P02088 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
Hbb-b1P02088 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hbb-b1P02088 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hbb-b1P02088 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hbb-b1P02088 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hbb-b1P02088 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hbb-b1P02088 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hbb-b1P02088 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hbb-b1P02088 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hbb-b1P02088 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hbb-b1P02088 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hbb-b1P02088 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hbb-b1P02088 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hbb-b1P02088 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hbb-b1P02088 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hbb-b1P02088 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hbb-b1P02088 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC16.59■□□□□ 0.25
Hbb-b1P02088 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hbb-b1P02088 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC16.59■□□□□ 0.25
Hbb-b1P02088 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hbb-b1P02088 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Hbb-b1P02088 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Hbb-b1P02088 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hbb-b1P02088 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC16.57■□□□□ 0.24
Hbb-b1P02088 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hbb-b1P02088 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Hbb-b1P02088 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hbb-b1P02088 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Hbb-b1P02088 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Hbb-b1P02088 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hbb-b1P02088 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Hbb-b1P02088 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Hbb-b1P02088 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Hbb-b1P02088 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Hbb-b1P02088 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Hbb-b1P02088 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Hbb-b1P02088 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Hbb-b1P02088 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Hbb-b1P02088 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hbb-b1P02088 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Hbb-b1P02088 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Hbb-b1P02088 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Hbb-b1P02088 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hbb-b1P02088 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hbb-b1P02088 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Hbb-b1P02088 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Hbb-b1P02088 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hbb-b1P02088 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hbb-b1P02088 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Hbb-b1P02088 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Hbb-b1P02088 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC16.52■□□□□ 0.23
Hbb-b1P02088 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Hbb-b1P02088 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Hbb-b1P02088 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hbb-b1P02088 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Hbb-b1P02088 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Hbb-b1P02088 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Hbb-b1P02088 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Hbb-b1P02088 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Hbb-b1P02088 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Hbb-b1P02088 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Hbb-b1P02088 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hbb-b1P02088 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hbb-b1P02088 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hbb-b1P02088 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hbb-b1P02088 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hbb-b1P02088 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Hbb-b1P02088 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hbb-b1P02088 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hbb-b1P02088 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hbb-b1P02088 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hbb-b1P02088 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hbb-b1P02088 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms