Protein–RNA interactions for Protein: O88746

Tom1, Target of Myb protein 1, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tom1O88746 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC32.9■■■□□ 2.86
Tom1O88746 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
Tom1O88746 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
Tom1O88746 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
Tom1O88746 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
Tom1O88746 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
Tom1O88746 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
Tom1O88746 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC32.87■■■□□ 2.85
Tom1O88746 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC32.86■■■□□ 2.85
Tom1O88746 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC32.85■■■□□ 2.85
Tom1O88746 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
Tom1O88746 Gm5522-201ENSMUST00000189483 1242 ntBASIC32.85■■■□□ 2.85
Tom1O88746 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC32.85■■■□□ 2.85
Tom1O88746 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
Tom1O88746 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC32.83■■■□□ 2.85
Tom1O88746 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
Tom1O88746 Gm10420-201ENSMUST00000121713 882 ntBASIC32.82■■■□□ 2.84
Tom1O88746 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC32.81■■■□□ 2.84
Tom1O88746 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC32.81■■■□□ 2.84
Tom1O88746 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC32.8■■■□□ 2.84
Tom1O88746 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
Tom1O88746 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
Tom1O88746 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC32.79■■■□□ 2.84
Tom1O88746 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
Tom1O88746 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
Tom1O88746 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC32.78■■■□□ 2.84
Tom1O88746 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC32.78■■■□□ 2.84
Tom1O88746 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC32.78■■■□□ 2.84
Tom1O88746 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC32.77■■■□□ 2.84
Tom1O88746 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC32.77■■■□□ 2.84
Tom1O88746 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
Tom1O88746 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
Tom1O88746 AC093043.1-201ENSMUST00000226700 898 ntBASIC32.75■■■□□ 2.83
Tom1O88746 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
Tom1O88746 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC32.75■■■□□ 2.83
Tom1O88746 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC32.74■■■□□ 2.83
Tom1O88746 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
Tom1O88746 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC32.73■■■□□ 2.83
Tom1O88746 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
Tom1O88746 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
Tom1O88746 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
Tom1O88746 Rps24-207ENSMUST00000224568 714 ntBASIC32.7■■■□□ 2.83
Tom1O88746 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
Tom1O88746 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC32.69■■■□□ 2.82
Tom1O88746 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
Tom1O88746 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
Tom1O88746 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
Tom1O88746 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
Tom1O88746 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
Tom1O88746 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
Tom1O88746 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Tom1O88746 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Tom1O88746 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC32.62■■■□□ 2.81
Tom1O88746 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC32.62■■■□□ 2.81
Tom1O88746 Gm12818-201ENSMUST00000117562 1349 ntBASIC32.61■■■□□ 2.81
Tom1O88746 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC32.61■■■□□ 2.81
Tom1O88746 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
Tom1O88746 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
Tom1O88746 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC32.59■■■□□ 2.81
Tom1O88746 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
Tom1O88746 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
Tom1O88746 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
Tom1O88746 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC32.58■■■□□ 2.81
Tom1O88746 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC32.58■■■□□ 2.81
Tom1O88746 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
Tom1O88746 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
Tom1O88746 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC32.57■■■□□ 2.8
Tom1O88746 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC32.56■■■□□ 2.8
Tom1O88746 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC32.56■■■□□ 2.8
Tom1O88746 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC32.56■■■□□ 2.8
Tom1O88746 Gm13889-201ENSMUST00000099689 1386 ntBASIC32.56■■■□□ 2.8
Tom1O88746 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC32.55■■■□□ 2.8
Tom1O88746 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
Tom1O88746 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
Tom1O88746 Pcf11-205ENSMUST00000208255 1720 ntBASIC32.54■■■□□ 2.8
Tom1O88746 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Tom1O88746 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
Tom1O88746 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Tom1O88746 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC32.52■■■□□ 2.8
Tom1O88746 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
Tom1O88746 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC32.52■■■□□ 2.8
Tom1O88746 AC151971.4-201ENSMUST00000214717 704 ntBASIC32.52■■■□□ 2.8
Tom1O88746 Gm9910-201ENSMUST00000195385 1550 ntBASIC32.52■■■□□ 2.8
Tom1O88746 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC32.51■■■□□ 2.8
Tom1O88746 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC32.51■■■□□ 2.79
Tom1O88746 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Tom1O88746 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Tom1O88746 Gm45102-201ENSMUST00000207427 857 ntBASIC32.48■■■□□ 2.79
Tom1O88746 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Tom1O88746 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
Tom1O88746 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
Tom1O88746 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
Tom1O88746 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC32.44■■■□□ 2.78
Tom1O88746 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC32.44■■■□□ 2.78
Tom1O88746 Gm15820-201ENSMUST00000201566 728 ntBASIC32.44■■■□□ 2.78
Tom1O88746 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Tom1O88746 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC32.43■■■□□ 2.78
Tom1O88746 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC32.42■■■□□ 2.78
Tom1O88746 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC32.42■■■□□ 2.78
Tom1O88746 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC32.41■■■□□ 2.78
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms