Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 MIR3648-2-201ENST00000581792 180 ntBASIC24.8■■□□□ 1.56
SNRNP200O75643 MIR3648-1-201ENST00000615959 180 ntBASIC24.8■■□□□ 1.56
SNRNP200O75643 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC24.8■■□□□ 1.56
SNRNP200O75643 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
SNRNP200O75643 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC24.79■■□□□ 1.56
SNRNP200O75643 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
SNRNP200O75643 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC24.79■■□□□ 1.56
SNRNP200O75643 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC24.79■■□□□ 1.56
SNRNP200O75643 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC24.78■■□□□ 1.56
SNRNP200O75643 AL139393.2-201ENST00000608721 2025 ntBASIC24.77■■□□□ 1.56
SNRNP200O75643 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
SNRNP200O75643 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC24.77■■□□□ 1.56
SNRNP200O75643 AC016575.1-201ENST00000607026 382 ntBASIC24.76■■□□□ 1.55
SNRNP200O75643 DUX4L11-201ENST00000611504 1267 ntBASIC24.76■■□□□ 1.55
SNRNP200O75643 DUX4L12-201ENST00000614593 1267 ntBASIC24.76■■□□□ 1.55
SNRNP200O75643 DUX4L14-201ENST00000621227 1267 ntBASIC24.76■■□□□ 1.55
SNRNP200O75643 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC24.76■■□□□ 1.55
SNRNP200O75643 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC24.76■■□□□ 1.55
SNRNP200O75643 DUX4L13-201ENST00000554103 1267 ntBASIC24.75■■□□□ 1.55
SNRNP200O75643 DUX4L15-201ENST00000611059 1267 ntBASIC24.75■■□□□ 1.55
SNRNP200O75643 DUX4L23-201ENST00000615195 1269 ntBASIC24.75■■□□□ 1.55
SNRNP200O75643 DUX4L24-201ENST00000617576 1269 ntBASIC24.75■■□□□ 1.55
SNRNP200O75643 DUX4L22-201ENST00000618238 1269 ntBASIC24.75■■□□□ 1.55
SNRNP200O75643 DUX4L20-201ENST00000619712 1269 ntBASIC24.75■■□□□ 1.55
SNRNP200O75643 DUX4L21-201ENST00000622058 1269 ntBASIC24.75■■□□□ 1.55
SNRNP200O75643 DUX4L10-201ENST00000622460 1267 ntBASIC24.75■■□□□ 1.55
SNRNP200O75643 DUX4L25-201ENST00000624915 1269 ntBASIC24.75■■□□□ 1.55
SNRNP200O75643 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
SNRNP200O75643 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC24.74■■□□□ 1.55
SNRNP200O75643 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC24.74■■□□□ 1.55
SNRNP200O75643 RNF166-209ENST00000567844 633 ntTSL 5 BASIC24.74■■□□□ 1.55
SNRNP200O75643 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC24.74■■□□□ 1.55
SNRNP200O75643 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC24.74■■□□□ 1.55
SNRNP200O75643 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
SNRNP200O75643 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC24.73■■□□□ 1.55
SNRNP200O75643 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC24.73■■□□□ 1.55
SNRNP200O75643 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
SNRNP200O75643 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
SNRNP200O75643 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC24.73■■□□□ 1.55
SNRNP200O75643 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC24.73■■□□□ 1.55
SNRNP200O75643 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
SNRNP200O75643 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC24.72■■□□□ 1.55
SNRNP200O75643 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC24.72■■□□□ 1.55
SNRNP200O75643 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC24.72■■□□□ 1.55
SNRNP200O75643 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC24.72■■□□□ 1.55
SNRNP200O75643 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
SNRNP200O75643 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
SNRNP200O75643 MACF1-219ENST00000484793 834 ntTSL 2 BASIC24.71■■□□□ 1.55
SNRNP200O75643 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC24.71■■□□□ 1.55
SNRNP200O75643 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC24.7■■□□□ 1.55
SNRNP200O75643 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
SNRNP200O75643 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC24.7■■□□□ 1.54
SNRNP200O75643 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
SNRNP200O75643 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
SNRNP200O75643 AC100797.4-201ENST00000631653 1827 ntBASIC24.69■■□□□ 1.54
SNRNP200O75643 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC24.69■■□□□ 1.54
SNRNP200O75643 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC24.69■■□□□ 1.54
SNRNP200O75643 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
SNRNP200O75643 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
SNRNP200O75643 PEX7-203ENST00000541292 945 ntTSL 5 BASIC24.68■■□□□ 1.54
SNRNP200O75643 CHML-204ENST00000638121 920 ntTSL 2 BASIC24.68■■□□□ 1.54
SNRNP200O75643 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
SNRNP200O75643 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC24.67■■□□□ 1.54
SNRNP200O75643 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
SNRNP200O75643 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC24.67■■□□□ 1.54
SNRNP200O75643 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC24.66■■□□□ 1.54
SNRNP200O75643 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC24.66■■□□□ 1.54
SNRNP200O75643 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SNRNP200O75643 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SNRNP200O75643 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SNRNP200O75643 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC24.65■■□□□ 1.54
SNRNP200O75643 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
SNRNP200O75643 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC24.65■■□□□ 1.54
SNRNP200O75643 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.54
SNRNP200O75643 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
SNRNP200O75643 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC24.63■■□□□ 1.53
SNRNP200O75643 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
SNRNP200O75643 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
SNRNP200O75643 CHST11-202ENST00000546689 756 ntTSL 2 BASIC24.62■■□□□ 1.53
SNRNP200O75643 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SNRNP200O75643 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SNRNP200O75643 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC24.62■■□□□ 1.53
SNRNP200O75643 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
SNRNP200O75643 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SNRNP200O75643 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
SNRNP200O75643 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
SNRNP200O75643 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
SNRNP200O75643 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SNRNP200O75643 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
SNRNP200O75643 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC24.6■■□□□ 1.53
SNRNP200O75643 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
SNRNP200O75643 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
SNRNP200O75643 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC24.59■■□□□ 1.53
SNRNP200O75643 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
SNRNP200O75643 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC24.59■■□□□ 1.53
SNRNP200O75643 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SNRNP200O75643 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC24.59■■□□□ 1.53
SNRNP200O75643 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
SNRNP200O75643 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.53
SNRNP200O75643 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms