Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC29.7■■■□□ 2.35
PRPF40AO75400 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
PRPF40AO75400 SHF-208ENST00000560734 1731 ntTSL 3 BASIC29.7■■■□□ 2.34
PRPF40AO75400 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC29.7■■■□□ 2.34
PRPF40AO75400 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC29.69■■■□□ 2.34
PRPF40AO75400 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
PRPF40AO75400 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC29.69■■■□□ 2.34
PRPF40AO75400 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC29.69■■■□□ 2.34
PRPF40AO75400 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC29.69■■■□□ 2.34
PRPF40AO75400 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
PRPF40AO75400 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC29.68■■■□□ 2.34
PRPF40AO75400 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
PRPF40AO75400 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC29.68■■■□□ 2.34
PRPF40AO75400 AP004833.2-201ENST00000532228 1454 ntBASIC29.68■■■□□ 2.34
PRPF40AO75400 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
PRPF40AO75400 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
PRPF40AO75400 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
PRPF40AO75400 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC29.67■■■□□ 2.34
PRPF40AO75400 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC29.66■■■□□ 2.34
PRPF40AO75400 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC29.66■■■□□ 2.34
PRPF40AO75400 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC29.66■■■□□ 2.34
PRPF40AO75400 AC097358.2-201ENST00000607541 1159 ntBASIC29.66■■■□□ 2.34
PRPF40AO75400 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
PRPF40AO75400 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
PRPF40AO75400 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
PRPF40AO75400 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC29.64■■■□□ 2.34
PRPF40AO75400 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC29.64■■■□□ 2.34
PRPF40AO75400 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC29.64■■■□□ 2.34
PRPF40AO75400 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC29.64■■■□□ 2.34
PRPF40AO75400 LINC01003-201ENST00000564834 1764 ntBASIC29.64■■■□□ 2.34
PRPF40AO75400 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
PRPF40AO75400 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC29.63■■■□□ 2.33
PRPF40AO75400 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
PRPF40AO75400 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
PRPF40AO75400 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC29.63■■■□□ 2.33
PRPF40AO75400 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC29.63■■■□□ 2.33
PRPF40AO75400 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC29.63■■■□□ 2.33
PRPF40AO75400 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
PRPF40AO75400 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
PRPF40AO75400 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
PRPF40AO75400 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
PRPF40AO75400 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC29.62■■■□□ 2.33
PRPF40AO75400 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC29.62■■■□□ 2.33
PRPF40AO75400 PKM-203ENST00000389093 2279 ntTSL 5 BASIC29.62■■■□□ 2.33
PRPF40AO75400 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC29.61■■■□□ 2.33
PRPF40AO75400 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
PRPF40AO75400 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
PRPF40AO75400 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
PRPF40AO75400 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
PRPF40AO75400 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC29.6■■■□□ 2.33
PRPF40AO75400 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
PRPF40AO75400 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC29.6■■■□□ 2.33
PRPF40AO75400 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC29.59■■■□□ 2.33
PRPF40AO75400 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
PRPF40AO75400 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC29.58■■■□□ 2.33
PRPF40AO75400 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
PRPF40AO75400 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC29.58■■■□□ 2.33
PRPF40AO75400 AC136428.2-201ENST00000563187 214 ntBASIC29.58■■■□□ 2.33
PRPF40AO75400 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC29.57■■■□□ 2.32
PRPF40AO75400 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC29.57■■■□□ 2.32
PRPF40AO75400 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
PRPF40AO75400 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC29.57■■■□□ 2.32
PRPF40AO75400 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
PRPF40AO75400 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC29.55■■■□□ 2.32
PRPF40AO75400 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC29.55■■■□□ 2.32
PRPF40AO75400 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
PRPF40AO75400 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC29.55■■■□□ 2.32
PRPF40AO75400 AL449106.1-201ENST00000608517 1980 ntBASIC29.53■■■□□ 2.32
PRPF40AO75400 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC29.53■■■□□ 2.32
PRPF40AO75400 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC29.53■■■□□ 2.32
PRPF40AO75400 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
PRPF40AO75400 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC29.53■■■□□ 2.32
PRPF40AO75400 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC29.52■■■□□ 2.32
PRPF40AO75400 AC127502.1-201ENST00000399971 1502 ntBASIC29.52■■■□□ 2.32
PRPF40AO75400 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
PRPF40AO75400 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC29.52■■■□□ 2.32
PRPF40AO75400 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC29.52■■■□□ 2.32
PRPF40AO75400 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
PRPF40AO75400 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
PRPF40AO75400 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
PRPF40AO75400 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC29.5■■■□□ 2.31
PRPF40AO75400 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC29.49■■■□□ 2.31
PRPF40AO75400 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
PRPF40AO75400 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC29.48■■■□□ 2.31
PRPF40AO75400 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC29.48■■■□□ 2.31
PRPF40AO75400 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC29.47■■■□□ 2.31
PRPF40AO75400 AC100797.4-201ENST00000631653 1827 ntBASIC29.46■■■□□ 2.31
PRPF40AO75400 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC29.46■■■□□ 2.31
PRPF40AO75400 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
PRPF40AO75400 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC29.46■■■□□ 2.31
PRPF40AO75400 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
PRPF40AO75400 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC29.45■■■□□ 2.31
PRPF40AO75400 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC29.45■■■□□ 2.31
PRPF40AO75400 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC29.45■■■□□ 2.3
PRPF40AO75400 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
PRPF40AO75400 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
PRPF40AO75400 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC29.44■■■□□ 2.3
PRPF40AO75400 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC29.44■■■□□ 2.3
PRPF40AO75400 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC29.44■■■□□ 2.3
PRPF40AO75400 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms