Protein–RNA interactions for Protein: O70258

Sgce, Epsilon-sarcoglycan, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgceO70258 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
SgceO70258 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SgceO70258 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SgceO70258 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20.87■□□□□ 0.93
SgceO70258 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SgceO70258 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
SgceO70258 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SgceO70258 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SgceO70258 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SgceO70258 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SgceO70258 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SgceO70258 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SgceO70258 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SgceO70258 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.84■□□□□ 0.93
SgceO70258 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
SgceO70258 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SgceO70258 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.84■□□□□ 0.93
SgceO70258 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SgceO70258 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SgceO70258 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SgceO70258 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SgceO70258 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SgceO70258 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SgceO70258 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SgceO70258 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
SgceO70258 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SgceO70258 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.82■□□□□ 0.92
SgceO70258 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SgceO70258 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SgceO70258 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.81■□□□□ 0.92
SgceO70258 Nkain2-201ENSMUST00000092602 558 ntBASIC20.81■□□□□ 0.92
SgceO70258 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SgceO70258 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SgceO70258 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SgceO70258 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SgceO70258 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.79■□□□□ 0.92
SgceO70258 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
SgceO70258 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.79■□□□□ 0.92
SgceO70258 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SgceO70258 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
SgceO70258 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
SgceO70258 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
SgceO70258 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
SgceO70258 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SgceO70258 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
SgceO70258 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
SgceO70258 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
SgceO70258 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.77■□□□□ 0.92
SgceO70258 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
SgceO70258 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SgceO70258 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SgceO70258 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SgceO70258 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SgceO70258 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SgceO70258 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SgceO70258 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
SgceO70258 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SgceO70258 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SgceO70258 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SgceO70258 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.75■□□□□ 0.91
SgceO70258 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SgceO70258 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SgceO70258 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SgceO70258 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.74■□□□□ 0.91
SgceO70258 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
SgceO70258 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SgceO70258 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.73■□□□□ 0.91
SgceO70258 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
SgceO70258 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SgceO70258 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SgceO70258 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.72■□□□□ 0.91
SgceO70258 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SgceO70258 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SgceO70258 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.72■□□□□ 0.91
SgceO70258 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SgceO70258 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.71■□□□□ 0.91
SgceO70258 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SgceO70258 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.71■□□□□ 0.91
SgceO70258 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
SgceO70258 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SgceO70258 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SgceO70258 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.69■□□□□ 0.9
SgceO70258 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
SgceO70258 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SgceO70258 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
SgceO70258 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SgceO70258 Gm6821-201ENSMUST00000107540 542 ntBASIC20.66■□□□□ 0.9
SgceO70258 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SgceO70258 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.66■□□□□ 0.9
SgceO70258 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SgceO70258 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SgceO70258 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SgceO70258 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SgceO70258 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SgceO70258 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SgceO70258 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.65■□□□□ 0.9
SgceO70258 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SgceO70258 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.64■□□□□ 0.9
SgceO70258 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.64■□□□□ 0.89
SgceO70258 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms