Protein–RNA interactions for Protein: O35445

Rnf5, E3 ubiquitin-protein ligase RNF5, mousemouse

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf5O35445 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Rnf5O35445 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf5O35445 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf5O35445 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf5O35445 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rnf5O35445 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC18.76■□□□□ 0.59
Rnf5O35445 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf5O35445 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf5O35445 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC18.75■□□□□ 0.59
Rnf5O35445 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf5O35445 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf5O35445 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf5O35445 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rnf5O35445 Particl-201ENSMUST00000205370 1560 ntBASIC18.73■□□□□ 0.59
Rnf5O35445 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rnf5O35445 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
Rnf5O35445 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Rnf5O35445 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rnf5O35445 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf5O35445 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf5O35445 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf5O35445 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Rnf5O35445 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC18.71■□□□□ 0.59
Rnf5O35445 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf5O35445 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf5O35445 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf5O35445 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Rnf5O35445 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf5O35445 Gm37847-201ENSMUST00000192163 1497 ntBASIC18.7■□□□□ 0.58
Rnf5O35445 Gm31748-201ENSMUST00000194938 1497 ntBASIC18.7■□□□□ 0.58
Rnf5O35445 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Rnf5O35445 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Rnf5O35445 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf5O35445 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf5O35445 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf5O35445 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Rnf5O35445 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf5O35445 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Rnf5O35445 AC122428.3-201ENSMUST00000215551 2290 ntBASIC18.68■□□□□ 0.58
Rnf5O35445 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf5O35445 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Rnf5O35445 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rnf5O35445 Nkain2-201ENSMUST00000092602 558 ntBASIC18.67■□□□□ 0.58
Rnf5O35445 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Rnf5O35445 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf5O35445 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
Rnf5O35445 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf5O35445 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf5O35445 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Rnf5O35445 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Rnf5O35445 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rnf5O35445 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.66■□□□□ 0.58
Rnf5O35445 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
Rnf5O35445 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Rnf5O35445 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC18.65■□□□□ 0.58
Rnf5O35445 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf5O35445 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rnf5O35445 AC153890.1-201ENSMUST00000220021 2469 ntBASIC18.64■□□□□ 0.58
Rnf5O35445 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf5O35445 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC18.63■□□□□ 0.57
Rnf5O35445 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC18.63■□□□□ 0.57
Rnf5O35445 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rnf5O35445 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf5O35445 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC18.62■□□□□ 0.57
Rnf5O35445 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rnf5O35445 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rnf5O35445 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Rnf5O35445 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Rnf5O35445 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf5O35445 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf5O35445 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC18.6■□□□□ 0.57
Rnf5O35445 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf5O35445 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rnf5O35445 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf5O35445 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf5O35445 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC18.59■□□□□ 0.57
Rnf5O35445 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.59■□□□□ 0.57
Rnf5O35445 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rnf5O35445 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC18.58■□□□□ 0.57
Rnf5O35445 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rnf5O35445 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rnf5O35445 Gm42809-201ENSMUST00000198429 1138 ntBASIC18.58■□□□□ 0.56
Rnf5O35445 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf5O35445 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf5O35445 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rnf5O35445 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC18.56■□□□□ 0.56
Rnf5O35445 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
Rnf5O35445 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Rnf5O35445 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf5O35445 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf5O35445 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC18.53■□□□□ 0.56
Rnf5O35445 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC18.53■□□□□ 0.56
Rnf5O35445 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf5O35445 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf5O35445 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf5O35445 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf5O35445 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf5O35445 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf5O35445 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf5O35445 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms