Protein–RNA interactions for Protein: O15534

PER1, Period circadian protein homolog 1, humanhuman

Predicted RBP Predictions only

Length 1,290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER1O15534 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC35.31■■■■□ 3.24
PER1O15534 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC35.31■■■■□ 3.24
PER1O15534 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC35.31■■■■□ 3.24
PER1O15534 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC35.31■■■■□ 3.24
PER1O15534 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC35.29■■■■□ 3.24
PER1O15534 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC35.29■■■■□ 3.24
PER1O15534 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC35.29■■■■□ 3.24
PER1O15534 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC35.29■■■■□ 3.24
PER1O15534 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC35.28■■■■□ 3.24
PER1O15534 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC35.28■■■■□ 3.24
PER1O15534 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC35.28■■■■□ 3.24
PER1O15534 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC35.28■■■■□ 3.24
PER1O15534 LINC01971-201ENST00000617888 1048 ntBASIC35.27■■■■□ 3.24
PER1O15534 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC35.26■■■■□ 3.24
PER1O15534 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC35.26■■■■□ 3.24
PER1O15534 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC35.26■■■■□ 3.24
PER1O15534 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC35.25■■■■□ 3.23
PER1O15534 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC35.25■■■■□ 3.23
PER1O15534 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC35.24■■■■□ 3.23
PER1O15534 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC35.24■■■■□ 3.23
PER1O15534 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC35.24■■■■□ 3.23
PER1O15534 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC35.23■■■■□ 3.23
PER1O15534 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC35.23■■■■□ 3.23
PER1O15534 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC35.22■■■■□ 3.23
PER1O15534 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC35.22■■■■□ 3.23
PER1O15534 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC35.21■■■■□ 3.23
PER1O15534 AC100797.4-201ENST00000631653 1827 ntBASIC35.21■■■■□ 3.23
PER1O15534 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC35.21■■■■□ 3.23
PER1O15534 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC35.21■■■■□ 3.23
PER1O15534 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC35.21■■■■□ 3.23
PER1O15534 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC35.2■■■■□ 3.23
PER1O15534 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC35.19■■■■□ 3.22
PER1O15534 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC35.18■■■■□ 3.22
PER1O15534 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC35.18■■■■□ 3.22
PER1O15534 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC35.18■■■■□ 3.22
PER1O15534 DUX4L11-201ENST00000611504 1267 ntBASIC35.18■■■■□ 3.22
PER1O15534 DUX4L12-201ENST00000614593 1267 ntBASIC35.18■■■■□ 3.22
PER1O15534 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC35.18■■■■□ 3.22
PER1O15534 DUX4L14-201ENST00000621227 1267 ntBASIC35.18■■■■□ 3.22
PER1O15534 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC35.18■■■■□ 3.22
PER1O15534 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC35.17■■■■□ 3.22
PER1O15534 MEST-211ENST00000437945 1455 ntTSL 5 BASIC35.17■■■■□ 3.22
PER1O15534 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
PER1O15534 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC35.17■■■■□ 3.22
PER1O15534 MIR7108-201ENST00000614319 87 ntBASIC35.16■■■■□ 3.22
PER1O15534 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC35.16■■■■□ 3.22
PER1O15534 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC35.15■■■■□ 3.22
PER1O15534 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC35.15■■■■□ 3.22
PER1O15534 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC35.15■■■■□ 3.22
PER1O15534 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC35.14■■■■□ 3.22
PER1O15534 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC35.14■■■■□ 3.22
PER1O15534 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC35.13■■■■□ 3.21
PER1O15534 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC35.13■■■■□ 3.21
PER1O15534 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC35.13■■■■□ 3.21
PER1O15534 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC35.12■■■■□ 3.21
PER1O15534 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC35.11■■■■□ 3.21
PER1O15534 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC35.11■■■■□ 3.21
PER1O15534 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC35.1■■■■□ 3.21
PER1O15534 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC35.1■■■■□ 3.21
PER1O15534 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC35.1■■■■□ 3.21
PER1O15534 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC35.1■■■■□ 3.21
PER1O15534 DUX4L13-201ENST00000554103 1267 ntBASIC35.1■■■■□ 3.21
PER1O15534 DUX4L15-201ENST00000611059 1267 ntBASIC35.1■■■■□ 3.21
PER1O15534 DUX4L23-201ENST00000615195 1269 ntBASIC35.1■■■■□ 3.21
PER1O15534 DUX4L24-201ENST00000617576 1269 ntBASIC35.1■■■■□ 3.21
PER1O15534 DUX4L22-201ENST00000618238 1269 ntBASIC35.1■■■■□ 3.21
PER1O15534 DUX4L20-201ENST00000619712 1269 ntBASIC35.1■■■■□ 3.21
PER1O15534 DUX4L21-201ENST00000622058 1269 ntBASIC35.1■■■■□ 3.21
PER1O15534 DUX4L10-201ENST00000622460 1267 ntBASIC35.1■■■■□ 3.21
PER1O15534 DUX4L25-201ENST00000624915 1269 ntBASIC35.1■■■■□ 3.21
PER1O15534 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC35.1■■■■□ 3.21
PER1O15534 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC35.09■■■■□ 3.21
PER1O15534 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC35.09■■■■□ 3.21
PER1O15534 CHML-204ENST00000638121 920 ntTSL 2 BASIC35.08■■■■□ 3.21
PER1O15534 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC35.07■■■■□ 3.21
PER1O15534 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC35.07■■■■□ 3.21
PER1O15534 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC35.07■■■■□ 3.2
PER1O15534 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC35.06■■■■□ 3.2
PER1O15534 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2
PER1O15534 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC35.06■■■■□ 3.2
PER1O15534 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
PER1O15534 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC35.05■■■■□ 3.2
PER1O15534 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC35.05■■■■□ 3.2
PER1O15534 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
PER1O15534 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
PER1O15534 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
PER1O15534 SHF-206ENST00000560471 2499 ntTSL 5 BASIC35.03■■■■□ 3.2
PER1O15534 RNF166-209ENST00000567844 633 ntTSL 5 BASIC35.03■■■■□ 3.2
PER1O15534 CR559946.2-201ENST00000623684 991 ntBASIC35.03■■■■□ 3.2
PER1O15534 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.2
PER1O15534 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC35.03■■■■□ 3.2
PER1O15534 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC35.03■■■■□ 3.2
PER1O15534 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.2
PER1O15534 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC35.02■■■■□ 3.2
PER1O15534 MACF1-219ENST00000484793 834 ntTSL 2 BASIC35.02■■■■□ 3.2
PER1O15534 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC35.01■■■■□ 3.2
PER1O15534 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC35.01■■■■□ 3.2
PER1O15534 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC35■■■■□ 3.19
PER1O15534 DRD5P2-201ENST00000421395 2012 ntBASIC35■■■■□ 3.19
PER1O15534 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC35■■■■□ 3.19
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms