Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
ATP2A1O14983 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
ATP2A1O14983 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
ATP2A1O14983 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC29.65■■■□□ 2.34
ATP2A1O14983 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
ATP2A1O14983 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
ATP2A1O14983 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC29.63■■■□□ 2.33
ATP2A1O14983 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
ATP2A1O14983 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
ATP2A1O14983 TPT1-202ENST00000379055 948 ntTSL 2 BASIC29.61■■■□□ 2.33
ATP2A1O14983 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC29.61■■■□□ 2.33
ATP2A1O14983 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
ATP2A1O14983 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC29.61■■■□□ 2.33
ATP2A1O14983 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
ATP2A1O14983 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC29.6■■■□□ 2.33
ATP2A1O14983 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC29.6■■■□□ 2.33
ATP2A1O14983 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC29.6■■■□□ 2.33
ATP2A1O14983 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC29.6■■■□□ 2.33
ATP2A1O14983 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC29.6■■■□□ 2.33
ATP2A1O14983 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC29.6■■■□□ 2.33
ATP2A1O14983 GPX1-201ENST00000419349 1106 ntBASIC29.59■■■□□ 2.33
ATP2A1O14983 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC29.59■■■□□ 2.33
ATP2A1O14983 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC29.59■■■□□ 2.33
ATP2A1O14983 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC29.59■■■□□ 2.33
ATP2A1O14983 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
ATP2A1O14983 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC29.58■■■□□ 2.33
ATP2A1O14983 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
ATP2A1O14983 AC110285.7-201ENST00000624417 1536 ntBASIC29.57■■■□□ 2.32
ATP2A1O14983 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC29.57■■■□□ 2.32
ATP2A1O14983 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC29.57■■■□□ 2.32
ATP2A1O14983 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
ATP2A1O14983 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC29.57■■■□□ 2.32
ATP2A1O14983 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC29.57■■■□□ 2.32
ATP2A1O14983 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
ATP2A1O14983 RARRES2P2-201ENST00000394842 485 ntBASIC29.56■■■□□ 2.32
ATP2A1O14983 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC29.55■■■□□ 2.32
ATP2A1O14983 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC29.55■■■□□ 2.32
ATP2A1O14983 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC29.54■■■□□ 2.32
ATP2A1O14983 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC29.54■■■□□ 2.32
ATP2A1O14983 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
ATP2A1O14983 RNF126P1-201ENST00000567452 1320 ntBASIC29.53■■■□□ 2.32
ATP2A1O14983 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC29.53■■■□□ 2.32
ATP2A1O14983 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC29.53■■■□□ 2.32
ATP2A1O14983 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC29.52■■■□□ 2.32
ATP2A1O14983 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
ATP2A1O14983 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC29.52■■■□□ 2.32
ATP2A1O14983 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
ATP2A1O14983 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC29.52■■■□□ 2.32
ATP2A1O14983 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC29.52■■■□□ 2.32
ATP2A1O14983 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
ATP2A1O14983 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
ATP2A1O14983 MEST-211ENST00000437945 1455 ntTSL 5 BASIC29.51■■■□□ 2.31
ATP2A1O14983 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
ATP2A1O14983 CHST11-203ENST00000547956 936 ntTSL 2 BASIC29.51■■■□□ 2.31
ATP2A1O14983 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC29.51■■■□□ 2.31
ATP2A1O14983 AC148477.6-201ENST00000623746 465 ntBASIC29.5■■■□□ 2.31
ATP2A1O14983 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
ATP2A1O14983 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
ATP2A1O14983 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
ATP2A1O14983 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
ATP2A1O14983 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC29.49■■■□□ 2.31
ATP2A1O14983 RPS2-210ENST00000530225 765 ntTSL 2 BASIC29.49■■■□□ 2.31
ATP2A1O14983 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
ATP2A1O14983 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
ATP2A1O14983 ST7-AS1-201ENST00000456775 1889 ntBASIC29.48■■■□□ 2.31
ATP2A1O14983 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC29.48■■■□□ 2.31
ATP2A1O14983 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
ATP2A1O14983 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
ATP2A1O14983 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC29.48■■■□□ 2.31
ATP2A1O14983 PEX7-203ENST00000541292 945 ntTSL 5 BASIC29.48■■■□□ 2.31
ATP2A1O14983 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
ATP2A1O14983 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC29.47■■■□□ 2.31
ATP2A1O14983 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
ATP2A1O14983 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC29.47■■■□□ 2.31
ATP2A1O14983 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
ATP2A1O14983 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC29.47■■■□□ 2.31
ATP2A1O14983 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC29.47■■■□□ 2.31
ATP2A1O14983 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
ATP2A1O14983 CEP120-209ENST00000515110 606 ntTSL 3 BASIC29.46■■■□□ 2.31
ATP2A1O14983 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC29.46■■■□□ 2.31
ATP2A1O14983 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
ATP2A1O14983 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC29.46■■■□□ 2.31
ATP2A1O14983 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC29.46■■■□□ 2.31
ATP2A1O14983 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
ATP2A1O14983 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC29.45■■■□□ 2.31
ATP2A1O14983 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC29.45■■■□□ 2.31
ATP2A1O14983 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
ATP2A1O14983 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
ATP2A1O14983 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
ATP2A1O14983 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
ATP2A1O14983 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
ATP2A1O14983 ABHD17AP5-201ENST00000580133 923 ntBASIC29.43■■■□□ 2.3
ATP2A1O14983 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC29.43■■■□□ 2.3
ATP2A1O14983 AC022413.1-201ENST00000624602 984 ntBASIC29.43■■■□□ 2.3
ATP2A1O14983 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC29.43■■■□□ 2.3
ATP2A1O14983 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC29.42■■■□□ 2.3
ATP2A1O14983 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC29.42■■■□□ 2.3
ATP2A1O14983 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
ATP2A1O14983 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
ATP2A1O14983 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms