Protein–RNA interactions for Protein: O09111

Ndufb11, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial, mousemouse

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufb11O09111 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Ndufb11O09111 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ndufb11O09111 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
Ndufb11O09111 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ndufb11O09111 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ndufb11O09111 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ndufb11O09111 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Ndufb11O09111 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ndufb11O09111 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ndufb11O09111 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ndufb11O09111 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
Ndufb11O09111 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Ndufb11O09111 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ndufb11O09111 AL845457.1-201ENSMUST00000197244 68 ntBASIC18.95■□□□□ 0.62
Ndufb11O09111 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Ndufb11O09111 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ndufb11O09111 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ndufb11O09111 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC18.95■□□□□ 0.62
Ndufb11O09111 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ndufb11O09111 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ndufb11O09111 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ndufb11O09111 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Ndufb11O09111 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Ndufb11O09111 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC18.93■□□□□ 0.62
Ndufb11O09111 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ndufb11O09111 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC18.93■□□□□ 0.62
Ndufb11O09111 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ndufb11O09111 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ndufb11O09111 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.91■□□□□ 0.62
Ndufb11O09111 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ndufb11O09111 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ndufb11O09111 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ndufb11O09111 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ndufb11O09111 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ndufb11O09111 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Ndufb11O09111 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ndufb11O09111 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Ndufb11O09111 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.62
Ndufb11O09111 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ndufb11O09111 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ndufb11O09111 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
Ndufb11O09111 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ndufb11O09111 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ndufb11O09111 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.89■□□□□ 0.61
Ndufb11O09111 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ndufb11O09111 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ndufb11O09111 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ndufb11O09111 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC18.88■□□□□ 0.61
Ndufb11O09111 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ndufb11O09111 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ndufb11O09111 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Ndufb11O09111 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ndufb11O09111 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ndufb11O09111 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Ndufb11O09111 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ndufb11O09111 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Ndufb11O09111 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Ndufb11O09111 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ndufb11O09111 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Ndufb11O09111 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.85■□□□□ 0.61
Ndufb11O09111 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ndufb11O09111 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ndufb11O09111 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ndufb11O09111 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ndufb11O09111 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Ndufb11O09111 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ndufb11O09111 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ndufb11O09111 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ndufb11O09111 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ndufb11O09111 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ndufb11O09111 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ndufb11O09111 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ndufb11O09111 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ndufb11O09111 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ndufb11O09111 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ndufb11O09111 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Ndufb11O09111 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ndufb11O09111 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ndufb11O09111 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ndufb11O09111 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ndufb11O09111 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ndufb11O09111 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ndufb11O09111 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Ndufb11O09111 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ndufb11O09111 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ndufb11O09111 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ndufb11O09111 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ndufb11O09111 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ndufb11O09111 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Ndufb11O09111 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ndufb11O09111 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ndufb11O09111 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ndufb11O09111 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ndufb11O09111 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Ndufb11O09111 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ndufb11O09111 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ndufb11O09111 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ndufb11O09111 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ndufb11O09111 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.6
Ndufb11O09111 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms