Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
B020004C17RikJ3QP07 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
B020004C17RikJ3QP07 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
B020004C17RikJ3QP07 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC27.21■■□□□ 1.95
B020004C17RikJ3QP07 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
B020004C17RikJ3QP07 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC27.2■■□□□ 1.95
B020004C17RikJ3QP07 Gm37136-201ENSMUST00000194368 194 ntBASIC27.2■■□□□ 1.94
B020004C17RikJ3QP07 Gm16437-201ENSMUST00000025669 507 ntBASIC27.2■■□□□ 1.94
B020004C17RikJ3QP07 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC27.2■■□□□ 1.94
B020004C17RikJ3QP07 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC27.19■■□□□ 1.94
B020004C17RikJ3QP07 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC27.19■■□□□ 1.94
B020004C17RikJ3QP07 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC27.19■■□□□ 1.94
B020004C17RikJ3QP07 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
B020004C17RikJ3QP07 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
B020004C17RikJ3QP07 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
B020004C17RikJ3QP07 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
B020004C17RikJ3QP07 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
B020004C17RikJ3QP07 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC27.17■■□□□ 1.94
B020004C17RikJ3QP07 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
B020004C17RikJ3QP07 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
B020004C17RikJ3QP07 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
B020004C17RikJ3QP07 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC27.16■■□□□ 1.94
B020004C17RikJ3QP07 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
B020004C17RikJ3QP07 Gm45364-201ENSMUST00000210883 159 ntBASIC27.15■■□□□ 1.94
B020004C17RikJ3QP07 Gm9905-201ENSMUST00000065740 1845 ntBASIC27.15■■□□□ 1.94
B020004C17RikJ3QP07 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC27.14■■□□□ 1.93
B020004C17RikJ3QP07 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
B020004C17RikJ3QP07 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
B020004C17RikJ3QP07 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
B020004C17RikJ3QP07 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC27.12■■□□□ 1.93
B020004C17RikJ3QP07 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
B020004C17RikJ3QP07 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
B020004C17RikJ3QP07 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
B020004C17RikJ3QP07 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
B020004C17RikJ3QP07 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
B020004C17RikJ3QP07 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
B020004C17RikJ3QP07 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
B020004C17RikJ3QP07 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC27.11■■□□□ 1.93
B020004C17RikJ3QP07 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
B020004C17RikJ3QP07 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
B020004C17RikJ3QP07 Gm13889-201ENSMUST00000099689 1386 ntBASIC27.09■■□□□ 1.93
B020004C17RikJ3QP07 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC27.09■■□□□ 1.93
B020004C17RikJ3QP07 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
B020004C17RikJ3QP07 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
B020004C17RikJ3QP07 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC27.08■■□□□ 1.93
B020004C17RikJ3QP07 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
B020004C17RikJ3QP07 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
B020004C17RikJ3QP07 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
B020004C17RikJ3QP07 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC27.07■■□□□ 1.92
B020004C17RikJ3QP07 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC27.06■■□□□ 1.92
B020004C17RikJ3QP07 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
B020004C17RikJ3QP07 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
B020004C17RikJ3QP07 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
B020004C17RikJ3QP07 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
B020004C17RikJ3QP07 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC27.04■■□□□ 1.92
B020004C17RikJ3QP07 Gm12818-201ENSMUST00000117562 1349 ntBASIC27.04■■□□□ 1.92
B020004C17RikJ3QP07 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
B020004C17RikJ3QP07 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
B020004C17RikJ3QP07 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
B020004C17RikJ3QP07 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
B020004C17RikJ3QP07 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC27.02■■□□□ 1.92
B020004C17RikJ3QP07 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC27.01■■□□□ 1.91
B020004C17RikJ3QP07 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC27■■□□□ 1.91
B020004C17RikJ3QP07 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC27■■□□□ 1.91
B020004C17RikJ3QP07 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
B020004C17RikJ3QP07 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
B020004C17RikJ3QP07 Gm7332-201ENSMUST00000118351 454 ntBASIC26.99■■□□□ 1.91
B020004C17RikJ3QP07 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
B020004C17RikJ3QP07 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC26.99■■□□□ 1.91
B020004C17RikJ3QP07 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
B020004C17RikJ3QP07 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC26.99■■□□□ 1.91
B020004C17RikJ3QP07 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
B020004C17RikJ3QP07 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC26.96■■□□□ 1.91
B020004C17RikJ3QP07 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
B020004C17RikJ3QP07 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
B020004C17RikJ3QP07 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
B020004C17RikJ3QP07 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC26.95■■□□□ 1.9
B020004C17RikJ3QP07 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
B020004C17RikJ3QP07 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC26.95■■□□□ 1.9
B020004C17RikJ3QP07 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
B020004C17RikJ3QP07 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC26.94■■□□□ 1.9
B020004C17RikJ3QP07 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC26.94■■□□□ 1.9
B020004C17RikJ3QP07 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
B020004C17RikJ3QP07 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC26.93■■□□□ 1.9
B020004C17RikJ3QP07 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
B020004C17RikJ3QP07 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC26.92■■□□□ 1.9
B020004C17RikJ3QP07 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
B020004C17RikJ3QP07 Gm27502-201ENSMUST00000183495 199 ntBASIC26.92■■□□□ 1.9
B020004C17RikJ3QP07 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
B020004C17RikJ3QP07 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
B020004C17RikJ3QP07 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
B020004C17RikJ3QP07 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC26.9■■□□□ 1.9
B020004C17RikJ3QP07 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC26.9■■□□□ 1.9
B020004C17RikJ3QP07 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
B020004C17RikJ3QP07 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC26.89■■□□□ 1.9
B020004C17RikJ3QP07 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
B020004C17RikJ3QP07 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC26.89■■□□□ 1.89
B020004C17RikJ3QP07 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
B020004C17RikJ3QP07 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC26.88■■□□□ 1.89
B020004C17RikJ3QP07 Gm9812-201ENSMUST00000061934 968 ntBASIC26.88■■□□□ 1.89
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms