Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC24.22■■□□□ 1.47
Atf6F6VAN0 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC24.22■■□□□ 1.47
Atf6F6VAN0 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Atf6F6VAN0 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Atf6F6VAN0 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.47
Atf6F6VAN0 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
Atf6F6VAN0 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Atf6F6VAN0 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
Atf6F6VAN0 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
Atf6F6VAN0 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC24.2■■□□□ 1.46
Atf6F6VAN0 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC24.19■■□□□ 1.46
Atf6F6VAN0 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Atf6F6VAN0 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC24.19■■□□□ 1.46
Atf6F6VAN0 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Atf6F6VAN0 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
Atf6F6VAN0 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Atf6F6VAN0 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Atf6F6VAN0 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Atf6F6VAN0 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC24.17■■□□□ 1.46
Atf6F6VAN0 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC24.16■■□□□ 1.46
Atf6F6VAN0 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Atf6F6VAN0 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Atf6F6VAN0 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC24.14■■□□□ 1.46
Atf6F6VAN0 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Atf6F6VAN0 Nkain2-201ENSMUST00000092602 558 ntBASIC24.14■■□□□ 1.45
Atf6F6VAN0 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
Atf6F6VAN0 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC24.12■■□□□ 1.45
Atf6F6VAN0 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Atf6F6VAN0 AC122428.3-201ENSMUST00000215551 2290 ntBASIC24.12■■□□□ 1.45
Atf6F6VAN0 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
Atf6F6VAN0 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Atf6F6VAN0 Gm42809-201ENSMUST00000198429 1138 ntBASIC24.11■■□□□ 1.45
Atf6F6VAN0 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC24.11■■□□□ 1.45
Atf6F6VAN0 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC24.11■■□□□ 1.45
Atf6F6VAN0 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
Atf6F6VAN0 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Atf6F6VAN0 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
Atf6F6VAN0 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC24.1■■□□□ 1.45
Atf6F6VAN0 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC24.1■■□□□ 1.45
Atf6F6VAN0 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Atf6F6VAN0 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Atf6F6VAN0 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Atf6F6VAN0 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
Atf6F6VAN0 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.44
Atf6F6VAN0 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
Atf6F6VAN0 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC24.07■■□□□ 1.44
Atf6F6VAN0 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
Atf6F6VAN0 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Atf6F6VAN0 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Atf6F6VAN0 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC24.06■■□□□ 1.44
Atf6F6VAN0 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
Atf6F6VAN0 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
Atf6F6VAN0 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Atf6F6VAN0 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC24.05■■□□□ 1.44
Atf6F6VAN0 Gm9939-201ENSMUST00000067161 1154 ntBASIC24.05■■□□□ 1.44
Atf6F6VAN0 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Atf6F6VAN0 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Atf6F6VAN0 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
Atf6F6VAN0 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC24.01■■□□□ 1.43
Atf6F6VAN0 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
Atf6F6VAN0 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Atf6F6VAN0 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Atf6F6VAN0 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC24■■□□□ 1.43
Atf6F6VAN0 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC24■■□□□ 1.43
Atf6F6VAN0 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Atf6F6VAN0 Gm37847-201ENSMUST00000192163 1497 ntBASIC23.99■■□□□ 1.43
Atf6F6VAN0 Gm31748-201ENSMUST00000194938 1497 ntBASIC23.99■■□□□ 1.43
Atf6F6VAN0 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Atf6F6VAN0 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Atf6F6VAN0 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Atf6F6VAN0 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Atf6F6VAN0 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Atf6F6VAN0 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Atf6F6VAN0 Gm6821-201ENSMUST00000107540 542 ntBASIC23.97■■□□□ 1.43
Atf6F6VAN0 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Atf6F6VAN0 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Atf6F6VAN0 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Atf6F6VAN0 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
Atf6F6VAN0 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Atf6F6VAN0 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
Atf6F6VAN0 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
Atf6F6VAN0 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Atf6F6VAN0 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Atf6F6VAN0 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC23.93■■□□□ 1.42
Atf6F6VAN0 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC23.92■■□□□ 1.42
Atf6F6VAN0 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC23.92■■□□□ 1.42
Atf6F6VAN0 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Atf6F6VAN0 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Atf6F6VAN0 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Atf6F6VAN0 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Atf6F6VAN0 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
Atf6F6VAN0 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC23.9■■□□□ 1.42
Atf6F6VAN0 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC23.9■■□□□ 1.42
Atf6F6VAN0 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Atf6F6VAN0 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Atf6F6VAN0 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Atf6F6VAN0 Particl-201ENSMUST00000205370 1560 ntBASIC23.9■■□□□ 1.42
Atf6F6VAN0 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Atf6F6VAN0 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
Atf6F6VAN0 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms