Protein–RNA interactions for Protein: E9Q7P1

Col22a1, Collagen, type XXII, alpha 1, mousemouse

Predictions only

Length 1,613 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col22a1E9Q7P1 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC31.53■■■□□ 2.64
Col22a1E9Q7P1 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC31.53■■■□□ 2.64
Col22a1E9Q7P1 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Col22a1E9Q7P1 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Col22a1E9Q7P1 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC31.51■■■□□ 2.63
Col22a1E9Q7P1 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC31.5■■■□□ 2.63
Col22a1E9Q7P1 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Col22a1E9Q7P1 Gm5067-201ENSMUST00000170449 1009 ntBASIC31.49■■■□□ 2.63
Col22a1E9Q7P1 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC31.48■■■□□ 2.63
Col22a1E9Q7P1 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC31.48■■■□□ 2.63
Col22a1E9Q7P1 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC31.48■■■□□ 2.63
Col22a1E9Q7P1 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC31.48■■■□□ 2.63
Col22a1E9Q7P1 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Col22a1E9Q7P1 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
Col22a1E9Q7P1 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Col22a1E9Q7P1 Gm6658-202ENSMUST00000209493 1885 ntBASIC31.44■■■□□ 2.62
Col22a1E9Q7P1 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
Col22a1E9Q7P1 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Col22a1E9Q7P1 Gm10420-201ENSMUST00000121713 882 ntBASIC31.42■■■□□ 2.62
Col22a1E9Q7P1 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC31.42■■■□□ 2.62
Col22a1E9Q7P1 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC31.4■■■□□ 2.62
Col22a1E9Q7P1 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
Col22a1E9Q7P1 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC31.4■■■□□ 2.62
Col22a1E9Q7P1 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
Col22a1E9Q7P1 Mir3960-201ENSMUST00000198213 73 ntBASIC31.38■■■□□ 2.61
Col22a1E9Q7P1 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Col22a1E9Q7P1 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
Col22a1E9Q7P1 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC31.36■■■□□ 2.61
Col22a1E9Q7P1 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Col22a1E9Q7P1 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC31.36■■■□□ 2.61
Col22a1E9Q7P1 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Col22a1E9Q7P1 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Col22a1E9Q7P1 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC31.34■■■□□ 2.61
Col22a1E9Q7P1 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
Col22a1E9Q7P1 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Col22a1E9Q7P1 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Col22a1E9Q7P1 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC31.33■■■□□ 2.61
Col22a1E9Q7P1 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC31.32■■■□□ 2.6
Col22a1E9Q7P1 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC31.32■■■□□ 2.6
Col22a1E9Q7P1 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
Col22a1E9Q7P1 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Col22a1E9Q7P1 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC31.3■■■□□ 2.6
Col22a1E9Q7P1 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Col22a1E9Q7P1 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Col22a1E9Q7P1 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
Col22a1E9Q7P1 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC31.28■■■□□ 2.6
Col22a1E9Q7P1 Gm30023-201ENSMUST00000197970 889 ntBASIC31.28■■■□□ 2.6
Col22a1E9Q7P1 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC31.28■■■□□ 2.6
Col22a1E9Q7P1 AC151971.4-201ENSMUST00000214717 704 ntBASIC31.28■■■□□ 2.6
Col22a1E9Q7P1 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Col22a1E9Q7P1 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Col22a1E9Q7P1 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Col22a1E9Q7P1 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
Col22a1E9Q7P1 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Col22a1E9Q7P1 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC31.25■■■□□ 2.59
Col22a1E9Q7P1 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Col22a1E9Q7P1 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC31.24■■■□□ 2.59
Col22a1E9Q7P1 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Col22a1E9Q7P1 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
Col22a1E9Q7P1 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Col22a1E9Q7P1 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Col22a1E9Q7P1 Rps24-207ENSMUST00000224568 714 ntBASIC31.21■■■□□ 2.59
Col22a1E9Q7P1 AC093043.1-201ENSMUST00000226700 898 ntBASIC31.21■■■□□ 2.59
Col22a1E9Q7P1 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Col22a1E9Q7P1 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC31.2■■■□□ 2.59
Col22a1E9Q7P1 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
Col22a1E9Q7P1 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Col22a1E9Q7P1 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC31.19■■■□□ 2.58
Col22a1E9Q7P1 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
Col22a1E9Q7P1 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Col22a1E9Q7P1 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC31.18■■■□□ 2.58
Col22a1E9Q7P1 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Col22a1E9Q7P1 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC31.17■■■□□ 2.58
Col22a1E9Q7P1 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
Col22a1E9Q7P1 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC31.16■■■□□ 2.58
Col22a1E9Q7P1 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Col22a1E9Q7P1 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
Col22a1E9Q7P1 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Col22a1E9Q7P1 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC31.15■■■□□ 2.58
Col22a1E9Q7P1 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
Col22a1E9Q7P1 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Col22a1E9Q7P1 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
Col22a1E9Q7P1 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
Col22a1E9Q7P1 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
Col22a1E9Q7P1 Gm5297-201ENSMUST00000198555 1171 ntBASIC31.1■■■□□ 2.57
Col22a1E9Q7P1 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC31.1■■■□□ 2.57
Col22a1E9Q7P1 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Col22a1E9Q7P1 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
Col22a1E9Q7P1 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC31.09■■■□□ 2.57
Col22a1E9Q7P1 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC31.09■■■□□ 2.57
Col22a1E9Q7P1 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Col22a1E9Q7P1 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC31.08■■■□□ 2.57
Col22a1E9Q7P1 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC31.08■■■□□ 2.57
Col22a1E9Q7P1 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC31.06■■■□□ 2.56
Col22a1E9Q7P1 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Col22a1E9Q7P1 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC31.06■■■□□ 2.56
Col22a1E9Q7P1 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Col22a1E9Q7P1 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
Col22a1E9Q7P1 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC31.05■■■□□ 2.56
Col22a1E9Q7P1 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC31.05■■■□□ 2.56
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms