Protein–RNA interactions for Protein: E9PVA8

Gcn1, eIF-2-alpha kinase activator GCN1, mousemouse

Known RBP Predictions only

Length 2,671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gcn1E9PVA8 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.05■□□□□ 0.96
Gcn1E9PVA8 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gcn1E9PVA8 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gcn1E9PVA8 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.05■□□□□ 0.96
Gcn1E9PVA8 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.05■□□□□ 0.96
Gcn1E9PVA8 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Gcn1E9PVA8 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gcn1E9PVA8 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC21.04■□□□□ 0.96
Gcn1E9PVA8 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Gcn1E9PVA8 Gm13238-201ENSMUST00000117655 780 ntBASIC21.03■□□□□ 0.96
Gcn1E9PVA8 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Gcn1E9PVA8 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Gcn1E9PVA8 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.03■□□□□ 0.96
Gcn1E9PVA8 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Gcn1E9PVA8 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Gcn1E9PVA8 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Gcn1E9PVA8 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Gcn1E9PVA8 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Gcn1E9PVA8 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
Gcn1E9PVA8 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.01■□□□□ 0.95
Gcn1E9PVA8 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Gcn1E9PVA8 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Gcn1E9PVA8 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Gcn1E9PVA8 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Gcn1E9PVA8 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Gcn1E9PVA8 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC20.99■□□□□ 0.95
Gcn1E9PVA8 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Gcn1E9PVA8 Gm9959-201ENSMUST00000068277 390 ntBASIC20.99■□□□□ 0.95
Gcn1E9PVA8 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.99■□□□□ 0.95
Gcn1E9PVA8 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gcn1E9PVA8 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gcn1E9PVA8 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.97■□□□□ 0.95
Gcn1E9PVA8 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gcn1E9PVA8 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gcn1E9PVA8 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Gcn1E9PVA8 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gcn1E9PVA8 Gm45364-201ENSMUST00000210883 159 ntBASIC20.96■□□□□ 0.95
Gcn1E9PVA8 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gcn1E9PVA8 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gcn1E9PVA8 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gcn1E9PVA8 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Gcn1E9PVA8 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gcn1E9PVA8 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Gcn1E9PVA8 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.93■□□□□ 0.94
Gcn1E9PVA8 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Gcn1E9PVA8 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Gcn1E9PVA8 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Gcn1E9PVA8 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gcn1E9PVA8 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gcn1E9PVA8 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gcn1E9PVA8 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Gcn1E9PVA8 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Gcn1E9PVA8 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Gcn1E9PVA8 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gcn1E9PVA8 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Gcn1E9PVA8 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.91■□□□□ 0.94
Gcn1E9PVA8 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gcn1E9PVA8 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gcn1E9PVA8 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Gcn1E9PVA8 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
Gcn1E9PVA8 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Gcn1E9PVA8 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Gcn1E9PVA8 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Gcn1E9PVA8 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gcn1E9PVA8 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gcn1E9PVA8 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.87■□□□□ 0.93
Gcn1E9PVA8 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gcn1E9PVA8 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Gcn1E9PVA8 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Gcn1E9PVA8 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gcn1E9PVA8 Gm45444-201ENSMUST00000211394 898 ntBASIC20.86■□□□□ 0.93
Gcn1E9PVA8 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.84■□□□□ 0.93
Gcn1E9PVA8 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.84■□□□□ 0.93
Gcn1E9PVA8 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gcn1E9PVA8 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gcn1E9PVA8 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gcn1E9PVA8 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gcn1E9PVA8 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.84■□□□□ 0.93
Gcn1E9PVA8 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Gcn1E9PVA8 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Gcn1E9PVA8 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gcn1E9PVA8 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.82■□□□□ 0.92
Gcn1E9PVA8 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.81■□□□□ 0.92
Gcn1E9PVA8 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Gcn1E9PVA8 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gcn1E9PVA8 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.8■□□□□ 0.92
Gcn1E9PVA8 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.8■□□□□ 0.92
Gcn1E9PVA8 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gcn1E9PVA8 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gcn1E9PVA8 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.79■□□□□ 0.92
Gcn1E9PVA8 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.79■□□□□ 0.92
Gcn1E9PVA8 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Gcn1E9PVA8 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.78■□□□□ 0.92
Gcn1E9PVA8 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.77■□□□□ 0.92
Gcn1E9PVA8 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gcn1E9PVA8 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gcn1E9PVA8 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gcn1E9PVA8 Mir3960-201ENSMUST00000198213 73 ntBASIC20.76■□□□□ 0.91
Gcn1E9PVA8 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Gcn1E9PVA8 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms