Protein–RNA interactions for Protein: E9PVA8

Gcn1, eIF-2-alpha kinase activator GCN1, mousemouse

Known RBP Predictions only

Length 2,671 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gcn1E9PVA8 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.05■□□□□ 0.96
Gcn1E9PVA8 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gcn1E9PVA8 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gcn1E9PVA8 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.05■□□□□ 0.96
Gcn1E9PVA8 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.05■□□□□ 0.96
Gcn1E9PVA8 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Gcn1E9PVA8 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gcn1E9PVA8 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC21.04■□□□□ 0.96
Gcn1E9PVA8 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Gcn1E9PVA8 Gm13238-201ENSMUST00000117655 780 ntBASIC21.03■□□□□ 0.96
Gcn1E9PVA8 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Gcn1E9PVA8 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Gcn1E9PVA8 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.03■□□□□ 0.96
Gcn1E9PVA8 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Gcn1E9PVA8 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Gcn1E9PVA8 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Gcn1E9PVA8 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Gcn1E9PVA8 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Gcn1E9PVA8 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
Gcn1E9PVA8 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.01■□□□□ 0.95
Gcn1E9PVA8 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Gcn1E9PVA8 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Gcn1E9PVA8 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Gcn1E9PVA8 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Gcn1E9PVA8 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Gcn1E9PVA8 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC20.99■□□□□ 0.95
Gcn1E9PVA8 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Gcn1E9PVA8 Gm9959-201ENSMUST00000068277 390 ntBASIC20.99■□□□□ 0.95
Gcn1E9PVA8 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.99■□□□□ 0.95
Gcn1E9PVA8 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gcn1E9PVA8 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gcn1E9PVA8 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.97■□□□□ 0.95
Gcn1E9PVA8 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gcn1E9PVA8 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gcn1E9PVA8 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Gcn1E9PVA8 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gcn1E9PVA8 Gm45364-201ENSMUST00000210883 159 ntBASIC20.96■□□□□ 0.95
Gcn1E9PVA8 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gcn1E9PVA8 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gcn1E9PVA8 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gcn1E9PVA8 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Gcn1E9PVA8 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gcn1E9PVA8 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Gcn1E9PVA8 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.93■□□□□ 0.94
Gcn1E9PVA8 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Gcn1E9PVA8 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Gcn1E9PVA8 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Gcn1E9PVA8 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gcn1E9PVA8 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gcn1E9PVA8 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gcn1E9PVA8 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Gcn1E9PVA8 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Gcn1E9PVA8 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Gcn1E9PVA8 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gcn1E9PVA8 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Gcn1E9PVA8 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.91■□□□□ 0.94
Gcn1E9PVA8 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gcn1E9PVA8 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gcn1E9PVA8 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Gcn1E9PVA8 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
Gcn1E9PVA8 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Gcn1E9PVA8 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Gcn1E9PVA8 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Gcn1E9PVA8 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gcn1E9PVA8 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gcn1E9PVA8 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.87■□□□□ 0.93
Gcn1E9PVA8 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gcn1E9PVA8 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Gcn1E9PVA8 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Gcn1E9PVA8 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gcn1E9PVA8 Gm45444-201ENSMUST00000211394 898 ntBASIC20.86■□□□□ 0.93
Gcn1E9PVA8 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.84■□□□□ 0.93
Gcn1E9PVA8 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.84■□□□□ 0.93
Gcn1E9PVA8 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gcn1E9PVA8 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gcn1E9PVA8 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gcn1E9PVA8 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gcn1E9PVA8 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.84■□□□□ 0.93
Gcn1E9PVA8 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Gcn1E9PVA8 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Gcn1E9PVA8 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gcn1E9PVA8 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.82■□□□□ 0.92
Gcn1E9PVA8 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.81■□□□□ 0.92
Gcn1E9PVA8 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Gcn1E9PVA8 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gcn1E9PVA8 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.8■□□□□ 0.92
Gcn1E9PVA8 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.8■□□□□ 0.92
Gcn1E9PVA8 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gcn1E9PVA8 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gcn1E9PVA8 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.79■□□□□ 0.92
Gcn1E9PVA8 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.79■□□□□ 0.92
Gcn1E9PVA8 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Gcn1E9PVA8 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.78■□□□□ 0.92
Gcn1E9PVA8 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.77■□□□□ 0.92
Gcn1E9PVA8 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gcn1E9PVA8 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gcn1E9PVA8 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gcn1E9PVA8 Mir3960-201ENSMUST00000198213 73 ntBASIC20.76■□□□□ 0.91
Gcn1E9PVA8 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Gcn1E9PVA8 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms