Protein–RNA interactions for Protein: E9PUP3

Slc4a9, Anion exchange protein, mousemouse

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc4a9E9PUP3 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Slc4a9E9PUP3 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Slc4a9E9PUP3 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Slc4a9E9PUP3 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Slc4a9E9PUP3 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Slc4a9E9PUP3 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC28.39■■■□□ 2.14
Slc4a9E9PUP3 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC28.38■■■□□ 2.13
Slc4a9E9PUP3 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Slc4a9E9PUP3 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC28.37■■■□□ 2.13
Slc4a9E9PUP3 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
Slc4a9E9PUP3 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC28.37■■■□□ 2.13
Slc4a9E9PUP3 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Slc4a9E9PUP3 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Slc4a9E9PUP3 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC28.34■■■□□ 2.13
Slc4a9E9PUP3 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Slc4a9E9PUP3 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC28.33■■■□□ 2.13
Slc4a9E9PUP3 Gm5921-201ENSMUST00000075898 882 ntBASIC28.32■■■□□ 2.12
Slc4a9E9PUP3 Gm15546-201ENSMUST00000122095 826 ntBASIC28.31■■■□□ 2.12
Slc4a9E9PUP3 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Slc4a9E9PUP3 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC28.31■■■□□ 2.12
Slc4a9E9PUP3 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC28.31■■■□□ 2.12
Slc4a9E9PUP3 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC28.3■■■□□ 2.12
Slc4a9E9PUP3 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC28.3■■■□□ 2.12
Slc4a9E9PUP3 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Slc4a9E9PUP3 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Slc4a9E9PUP3 Gm2415-204ENSMUST00000190235 2004 ntBASIC28.28■■■□□ 2.12
Slc4a9E9PUP3 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC28.28■■■□□ 2.12
Slc4a9E9PUP3 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Slc4a9E9PUP3 Pcf11-205ENSMUST00000208255 1720 ntBASIC28.26■■■□□ 2.12
Slc4a9E9PUP3 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Slc4a9E9PUP3 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC28.25■■■□□ 2.11
Slc4a9E9PUP3 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Slc4a9E9PUP3 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Slc4a9E9PUP3 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Slc4a9E9PUP3 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC28.24■■■□□ 2.11
Slc4a9E9PUP3 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Slc4a9E9PUP3 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Slc4a9E9PUP3 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC28.23■■■□□ 2.11
Slc4a9E9PUP3 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Slc4a9E9PUP3 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC28.23■■■□□ 2.11
Slc4a9E9PUP3 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Slc4a9E9PUP3 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Slc4a9E9PUP3 Gm10420-201ENSMUST00000121713 882 ntBASIC28.21■■■□□ 2.11
Slc4a9E9PUP3 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Slc4a9E9PUP3 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC28.18■■■□□ 2.1
Slc4a9E9PUP3 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC28.18■■■□□ 2.1
Slc4a9E9PUP3 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Slc4a9E9PUP3 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Slc4a9E9PUP3 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Slc4a9E9PUP3 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC28.17■■■□□ 2.1
Slc4a9E9PUP3 Gm12818-201ENSMUST00000117562 1349 ntBASIC28.17■■■□□ 2.1
Slc4a9E9PUP3 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Slc4a9E9PUP3 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC28.16■■■□□ 2.1
Slc4a9E9PUP3 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC28.16■■■□□ 2.1
Slc4a9E9PUP3 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Slc4a9E9PUP3 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Slc4a9E9PUP3 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC28.15■■■□□ 2.1
Slc4a9E9PUP3 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Slc4a9E9PUP3 Gm13889-201ENSMUST00000099689 1386 ntBASIC28.14■■■□□ 2.1
Slc4a9E9PUP3 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Slc4a9E9PUP3 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC28.14■■■□□ 2.1
Slc4a9E9PUP3 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC28.14■■■□□ 2.1
Slc4a9E9PUP3 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Slc4a9E9PUP3 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
Slc4a9E9PUP3 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Slc4a9E9PUP3 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Slc4a9E9PUP3 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Slc4a9E9PUP3 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Slc4a9E9PUP3 Gm5522-201ENSMUST00000189483 1242 ntBASIC28.12■■■□□ 2.09
Slc4a9E9PUP3 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC28.12■■■□□ 2.09
Slc4a9E9PUP3 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Slc4a9E9PUP3 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Slc4a9E9PUP3 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Slc4a9E9PUP3 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC28.1■■■□□ 2.09
Slc4a9E9PUP3 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
Slc4a9E9PUP3 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC28.09■■■□□ 2.09
Slc4a9E9PUP3 AC151971.4-201ENSMUST00000214717 704 ntBASIC28.09■■■□□ 2.09
Slc4a9E9PUP3 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC28.08■■■□□ 2.09
Slc4a9E9PUP3 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC28.08■■■□□ 2.09
Slc4a9E9PUP3 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC28.08■■■□□ 2.09
Slc4a9E9PUP3 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC28.08■■■□□ 2.08
Slc4a9E9PUP3 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Slc4a9E9PUP3 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC28.07■■■□□ 2.08
Slc4a9E9PUP3 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Slc4a9E9PUP3 Gm9910-201ENSMUST00000195385 1550 ntBASIC28.07■■■□□ 2.08
Slc4a9E9PUP3 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Slc4a9E9PUP3 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Slc4a9E9PUP3 Gm37136-201ENSMUST00000194368 194 ntBASIC28.06■■■□□ 2.08
Slc4a9E9PUP3 Gm6658-202ENSMUST00000209493 1885 ntBASIC28.06■■■□□ 2.08
Slc4a9E9PUP3 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC28.06■■■□□ 2.08
Slc4a9E9PUP3 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Slc4a9E9PUP3 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
Slc4a9E9PUP3 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC28.03■■■□□ 2.08
Slc4a9E9PUP3 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC28.03■■■□□ 2.08
Slc4a9E9PUP3 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Slc4a9E9PUP3 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Slc4a9E9PUP3 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC28.01■■■□□ 2.07
Slc4a9E9PUP3 AC093043.1-201ENSMUST00000226700 898 ntBASIC28.01■■■□□ 2.07
Slc4a9E9PUP3 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
Slc4a9E9PUP3 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms