Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC31.74■■■□□ 2.67
Scn7aB1AYL1 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC31.73■■■□□ 2.67
Scn7aB1AYL1 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC31.73■■■□□ 2.67
Scn7aB1AYL1 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC31.71■■■□□ 2.67
Scn7aB1AYL1 Gm9905-201ENSMUST00000065740 1845 ntBASIC31.71■■■□□ 2.67
Scn7aB1AYL1 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Scn7aB1AYL1 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC31.7■■■□□ 2.67
Scn7aB1AYL1 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC31.7■■■□□ 2.67
Scn7aB1AYL1 Gm37136-201ENSMUST00000194368 194 ntBASIC31.69■■■□□ 2.66
Scn7aB1AYL1 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC31.69■■■□□ 2.66
Scn7aB1AYL1 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC31.67■■■□□ 2.66
Scn7aB1AYL1 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Scn7aB1AYL1 Zxda-201ENSMUST00000117281 2621 ntBASIC31.66■■■□□ 2.66
Scn7aB1AYL1 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Scn7aB1AYL1 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Scn7aB1AYL1 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
Scn7aB1AYL1 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC31.66■■■□□ 2.66
Scn7aB1AYL1 Cap2-205ENSMUST00000225824 1634 ntBASIC31.65■■■□□ 2.66
Scn7aB1AYL1 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Scn7aB1AYL1 AC154454.1-201ENSMUST00000225253 216 ntBASIC31.63■■■□□ 2.65
Scn7aB1AYL1 Pkd1-207ENSMUST00000228550 1050 ntBASIC31.63■■■□□ 2.65
Scn7aB1AYL1 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Scn7aB1AYL1 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
Scn7aB1AYL1 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC31.62■■■□□ 2.65
Scn7aB1AYL1 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC31.62■■■□□ 2.65
Scn7aB1AYL1 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC31.62■■■□□ 2.65
Scn7aB1AYL1 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC31.62■■■□□ 2.65
Scn7aB1AYL1 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC31.61■■■□□ 2.65
Scn7aB1AYL1 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Scn7aB1AYL1 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Scn7aB1AYL1 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Scn7aB1AYL1 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC31.57■■■□□ 2.65
Scn7aB1AYL1 AC153504.1-201ENSMUST00000218379 2290 ntBASIC31.57■■■□□ 2.64
Scn7aB1AYL1 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC31.56■■■□□ 2.64
Scn7aB1AYL1 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC31.56■■■□□ 2.64
Scn7aB1AYL1 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Scn7aB1AYL1 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC31.55■■■□□ 2.64
Scn7aB1AYL1 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
Scn7aB1AYL1 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
Scn7aB1AYL1 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Scn7aB1AYL1 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC31.54■■■□□ 2.64
Scn7aB1AYL1 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC31.53■■■□□ 2.64
Scn7aB1AYL1 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC31.53■■■□□ 2.64
Scn7aB1AYL1 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Scn7aB1AYL1 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC31.51■■■□□ 2.64
Scn7aB1AYL1 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC31.51■■■□□ 2.63
Scn7aB1AYL1 Scarna2-201ENSMUST00000157560 414 ntBASIC31.51■■■□□ 2.63
Scn7aB1AYL1 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Scn7aB1AYL1 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Scn7aB1AYL1 Mir3960-201ENSMUST00000198213 73 ntBASIC31.5■■■□□ 2.63
Scn7aB1AYL1 Gm9806-201ENSMUST00000051080 552 ntBASIC31.5■■■□□ 2.63
Scn7aB1AYL1 Gm43445-201ENSMUST00000198564 2091 ntBASIC31.49■■■□□ 2.63
Scn7aB1AYL1 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC31.48■■■□□ 2.63
Scn7aB1AYL1 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC31.48■■■□□ 2.63
Scn7aB1AYL1 Gm4799-201ENSMUST00000095396 657 ntBASIC31.48■■■□□ 2.63
Scn7aB1AYL1 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC31.47■■■□□ 2.63
Scn7aB1AYL1 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Scn7aB1AYL1 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC31.47■■■□□ 2.63
Scn7aB1AYL1 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Scn7aB1AYL1 Gm11687-201ENSMUST00000118911 886 ntBASIC31.46■■■□□ 2.63
Scn7aB1AYL1 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Scn7aB1AYL1 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC31.45■■■□□ 2.63
Scn7aB1AYL1 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Scn7aB1AYL1 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC31.44■■■□□ 2.62
Scn7aB1AYL1 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC31.43■■■□□ 2.62
Scn7aB1AYL1 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
Scn7aB1AYL1 AC122317.2-201ENSMUST00000218708 1248 ntBASIC31.42■■■□□ 2.62
Scn7aB1AYL1 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Scn7aB1AYL1 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC31.41■■■□□ 2.62
Scn7aB1AYL1 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
Scn7aB1AYL1 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC31.39■■■□□ 2.62
Scn7aB1AYL1 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
Scn7aB1AYL1 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
Scn7aB1AYL1 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Scn7aB1AYL1 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Scn7aB1AYL1 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
Scn7aB1AYL1 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Scn7aB1AYL1 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC31.36■■■□□ 2.61
Scn7aB1AYL1 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC31.36■■■□□ 2.61
Scn7aB1AYL1 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
Scn7aB1AYL1 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC31.35■■■□□ 2.61
Scn7aB1AYL1 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Scn7aB1AYL1 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC31.34■■■□□ 2.61
Scn7aB1AYL1 Gm27502-201ENSMUST00000183495 199 ntBASIC31.33■■■□□ 2.61
Scn7aB1AYL1 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC31.32■■■□□ 2.61
Scn7aB1AYL1 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC31.32■■■□□ 2.6
Scn7aB1AYL1 Gm12366-201ENSMUST00000121722 873 ntBASIC31.32■■■□□ 2.6
Scn7aB1AYL1 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC31.32■■■□□ 2.6
Scn7aB1AYL1 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
Scn7aB1AYL1 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Scn7aB1AYL1 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC31.32■■■□□ 2.6
Scn7aB1AYL1 Gm5786-201ENSMUST00000085368 882 ntBASIC31.32■■■□□ 2.6
Scn7aB1AYL1 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC31.32■■■□□ 2.6
Scn7aB1AYL1 Gm13889-201ENSMUST00000099689 1386 ntBASIC31.32■■■□□ 2.6
Scn7aB1AYL1 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
Scn7aB1AYL1 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC31.31■■■□□ 2.6
Scn7aB1AYL1 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Scn7aB1AYL1 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC31.31■■■□□ 2.6
Scn7aB1AYL1 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
Scn7aB1AYL1 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms