Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 MIR6090-201ENST00000622481 60 ntBASIC20.68■□□□□ 0.9
SRRM4A7MD48 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SRRM4A7MD48 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
SRRM4A7MD48 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SRRM4A7MD48 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SRRM4A7MD48 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
SRRM4A7MD48 AC100797.4-201ENST00000631653 1827 ntBASIC20.67■□□□□ 0.9
SRRM4A7MD48 AC108673.1-201ENST00000510422 1159 ntBASIC20.66■□□□□ 0.9
SRRM4A7MD48 MIR3665-201ENST00000578708 105 ntBASIC20.66■□□□□ 0.9
SRRM4A7MD48 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC20.66■□□□□ 0.9
SRRM4A7MD48 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SRRM4A7MD48 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SRRM4A7MD48 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SRRM4A7MD48 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SRRM4A7MD48 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SRRM4A7MD48 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SRRM4A7MD48 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SRRM4A7MD48 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SRRM4A7MD48 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC20.64■□□□□ 0.89
SRRM4A7MD48 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SRRM4A7MD48 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SRRM4A7MD48 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC20.63■□□□□ 0.89
SRRM4A7MD48 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SRRM4A7MD48 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SRRM4A7MD48 NRG1-221ENST00000614767 762 ntTSL 5 BASIC20.62■□□□□ 0.89
SRRM4A7MD48 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
SRRM4A7MD48 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SRRM4A7MD48 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SRRM4A7MD48 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.61■□□□□ 0.89
SRRM4A7MD48 AP006261.1-201ENST00000584783 668 ntBASIC20.61■□□□□ 0.89
SRRM4A7MD48 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
SRRM4A7MD48 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SRRM4A7MD48 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SRRM4A7MD48 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SRRM4A7MD48 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SRRM4A7MD48 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
SRRM4A7MD48 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC20.59■□□□□ 0.89
SRRM4A7MD48 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SRRM4A7MD48 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.58■□□□□ 0.89
SRRM4A7MD48 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SRRM4A7MD48 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SRRM4A7MD48 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
SRRM4A7MD48 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC20.57■□□□□ 0.88
SRRM4A7MD48 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
SRRM4A7MD48 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SRRM4A7MD48 AC135983.2-203ENST00000454486 1613 ntBASIC20.56■□□□□ 0.88
SRRM4A7MD48 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SRRM4A7MD48 AC087741.3-201ENST00000624270 1347 ntBASIC20.56■□□□□ 0.88
SRRM4A7MD48 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
SRRM4A7MD48 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SRRM4A7MD48 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SRRM4A7MD48 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC20.56■□□□□ 0.88
SRRM4A7MD48 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SRRM4A7MD48 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.56■□□□□ 0.88
SRRM4A7MD48 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SRRM4A7MD48 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.55■□□□□ 0.88
SRRM4A7MD48 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.55■□□□□ 0.88
SRRM4A7MD48 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SRRM4A7MD48 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC20.55■□□□□ 0.88
SRRM4A7MD48 AL162393.1-201ENST00000437852 946 ntBASIC20.55■□□□□ 0.88
SRRM4A7MD48 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SRRM4A7MD48 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.54■□□□□ 0.88
SRRM4A7MD48 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SRRM4A7MD48 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.53■□□□□ 0.88
SRRM4A7MD48 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SRRM4A7MD48 WHAMMP2-203ENST00000563942 1603 ntBASIC20.53■□□□□ 0.88
SRRM4A7MD48 BX255925.1-201ENST00000566954 1854 ntBASIC20.52■□□□□ 0.88
SRRM4A7MD48 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
SRRM4A7MD48 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.51■□□□□ 0.87
SRRM4A7MD48 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
SRRM4A7MD48 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SRRM4A7MD48 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SRRM4A7MD48 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SRRM4A7MD48 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SRRM4A7MD48 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SRRM4A7MD48 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SRRM4A7MD48 LINC00273-201ENST00000539813 1452 ntBASIC20.5■□□□□ 0.87
SRRM4A7MD48 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.5■□□□□ 0.87
SRRM4A7MD48 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SRRM4A7MD48 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SRRM4A7MD48 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
SRRM4A7MD48 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
SRRM4A7MD48 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SRRM4A7MD48 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
SRRM4A7MD48 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SRRM4A7MD48 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SRRM4A7MD48 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SRRM4A7MD48 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
SRRM4A7MD48 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
SRRM4A7MD48 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
SRRM4A7MD48 LINC01003-201ENST00000564834 1764 ntBASIC20.48■□□□□ 0.87
SRRM4A7MD48 AP002414.2-202ENST00000590929 1450 ntBASIC20.48■□□□□ 0.87
SRRM4A7MD48 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SRRM4A7MD48 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SRRM4A7MD48 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SRRM4A7MD48 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.47■□□□□ 0.87
SRRM4A7MD48 AL121749.1-202ENST00000609313 2153 ntBASIC20.47■□□□□ 0.87
SRRM4A7MD48 CIB2-204ENST00000557846 934 ntTSL 3 BASIC20.47■□□□□ 0.87
SRRM4A7MD48 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
SRRM4A7MD48 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms