Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC39.36■■■■□ 3.89
Shroom2A2ALU4 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC39.36■■■■□ 3.89
Shroom2A2ALU4 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC39.35■■■■□ 3.89
Shroom2A2ALU4 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC39.35■■■■□ 3.89
Shroom2A2ALU4 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC39.35■■■■□ 3.89
Shroom2A2ALU4 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC39.34■■■■□ 3.89
Shroom2A2ALU4 Gm5297-201ENSMUST00000198555 1171 ntBASIC39.34■■■■□ 3.89
Shroom2A2ALU4 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC39.34■■■■□ 3.89
Shroom2A2ALU4 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC39.32■■■■□ 3.89
Shroom2A2ALU4 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC39.32■■■■□ 3.89
Shroom2A2ALU4 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC39.32■■■■□ 3.88
Shroom2A2ALU4 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC39.31■■■■□ 3.88
Shroom2A2ALU4 Gm10420-201ENSMUST00000121713 882 ntBASIC39.3■■■■□ 3.88
Shroom2A2ALU4 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC39.3■■■■□ 3.88
Shroom2A2ALU4 AC093043.1-201ENSMUST00000226700 898 ntBASIC39.3■■■■□ 3.88
Shroom2A2ALU4 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC39.29■■■■□ 3.88
Shroom2A2ALU4 Rps24-207ENSMUST00000224568 714 ntBASIC39.28■■■■□ 3.88
Shroom2A2ALU4 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC39.27■■■■□ 3.88
Shroom2A2ALU4 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC39.27■■■■□ 3.88
Shroom2A2ALU4 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC39.27■■■■□ 3.88
Shroom2A2ALU4 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC39.26■■■■□ 3.88
Shroom2A2ALU4 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC39.26■■■■□ 3.88
Shroom2A2ALU4 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC39.25■■■■□ 3.87
Shroom2A2ALU4 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC39.24■■■■□ 3.87
Shroom2A2ALU4 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC39.24■■■■□ 3.87
Shroom2A2ALU4 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC39.24■■■■□ 3.87
Shroom2A2ALU4 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC39.24■■■■□ 3.87
Shroom2A2ALU4 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC39.23■■■■□ 3.87
Shroom2A2ALU4 Mir3960-201ENSMUST00000198213 73 ntBASIC39.23■■■■□ 3.87
Shroom2A2ALU4 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC39.23■■■■□ 3.87
Shroom2A2ALU4 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC39.22■■■■□ 3.87
Shroom2A2ALU4 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC39.22■■■■□ 3.87
Shroom2A2ALU4 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC39.2■■■■□ 3.87
Shroom2A2ALU4 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC39.2■■■■□ 3.87
Shroom2A2ALU4 Serp2-204ENSMUST00000228055 705 ntBASIC39.19■■■■□ 3.86
Shroom2A2ALU4 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC39.18■■■■□ 3.86
Shroom2A2ALU4 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC39.18■■■■□ 3.86
Shroom2A2ALU4 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC39.17■■■■□ 3.86
Shroom2A2ALU4 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC39.17■■■■□ 3.86
Shroom2A2ALU4 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC39.16■■■■□ 3.86
Shroom2A2ALU4 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC39.16■■■■□ 3.86
Shroom2A2ALU4 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC39.16■■■■□ 3.86
Shroom2A2ALU4 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC39.16■■■■□ 3.86
Shroom2A2ALU4 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC39.14■■■■□ 3.86
Shroom2A2ALU4 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC39.14■■■■□ 3.86
Shroom2A2ALU4 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC39.14■■■■□ 3.86
Shroom2A2ALU4 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC39.14■■■■□ 3.86
Shroom2A2ALU4 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC39.12■■■■□ 3.85
Shroom2A2ALU4 AC151971.4-201ENSMUST00000214717 704 ntBASIC39.11■■■■□ 3.85
Shroom2A2ALU4 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC39.11■■■■□ 3.85
Shroom2A2ALU4 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC39.1■■■■□ 3.85
Shroom2A2ALU4 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC39.1■■■■□ 3.85
Shroom2A2ALU4 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC39.1■■■■□ 3.85
Shroom2A2ALU4 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC39.09■■■■□ 3.85
Shroom2A2ALU4 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC39.09■■■■□ 3.85
Shroom2A2ALU4 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC39.07■■■■□ 3.85
Shroom2A2ALU4 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC39.06■■■■□ 3.84
Shroom2A2ALU4 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC39.06■■■■□ 3.84
Shroom2A2ALU4 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC39.05■■■■□ 3.84
Shroom2A2ALU4 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC39.05■■■■□ 3.84
Shroom2A2ALU4 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC39.05■■■■□ 3.84
Shroom2A2ALU4 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC39.04■■■■□ 3.84
Shroom2A2ALU4 Gm30023-201ENSMUST00000197970 889 ntBASIC39.04■■■■□ 3.84
Shroom2A2ALU4 Gm45102-201ENSMUST00000207427 857 ntBASIC39.04■■■■□ 3.84
Shroom2A2ALU4 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC39.03■■■■□ 3.84
Shroom2A2ALU4 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC39.02■■■■□ 3.84
Shroom2A2ALU4 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC39.01■■■■□ 3.84
Shroom2A2ALU4 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC39■■■■□ 3.83
Shroom2A2ALU4 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC38.99■■■■□ 3.83
Shroom2A2ALU4 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC38.99■■■■□ 3.83
Shroom2A2ALU4 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC38.98■■■■□ 3.83
Shroom2A2ALU4 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC38.97■■■■□ 3.83
Shroom2A2ALU4 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC38.97■■■■□ 3.83
Shroom2A2ALU4 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC38.97■■■■□ 3.83
Shroom2A2ALU4 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC38.96■■■■□ 3.83
Shroom2A2ALU4 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC38.95■■■■□ 3.83
Shroom2A2ALU4 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC38.95■■■■□ 3.83
Shroom2A2ALU4 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC38.93■■■■□ 3.82
Shroom2A2ALU4 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC38.93■■■■□ 3.82
Shroom2A2ALU4 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC38.92■■■■□ 3.82
Shroom2A2ALU4 Gm15820-201ENSMUST00000201566 728 ntBASIC38.92■■■■□ 3.82
Shroom2A2ALU4 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC38.92■■■■□ 3.82
Shroom2A2ALU4 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC38.92■■■■□ 3.82
Shroom2A2ALU4 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC38.92■■■■□ 3.82
Shroom2A2ALU4 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC38.92■■■■□ 3.82
Shroom2A2ALU4 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC38.91■■■■□ 3.82
Shroom2A2ALU4 AC153911.1-201ENSMUST00000220378 758 ntBASIC38.91■■■■□ 3.82
Shroom2A2ALU4 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC38.91■■■■□ 3.82
Shroom2A2ALU4 Gm14117-201ENSMUST00000122417 843 ntBASIC38.89■■■■□ 3.82
Shroom2A2ALU4 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC38.88■■■■□ 3.81
Shroom2A2ALU4 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC38.87■■■■□ 3.81
Shroom2A2ALU4 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC38.87■■■■□ 3.81
Shroom2A2ALU4 Gm2415-204ENSMUST00000190235 2004 ntBASIC38.86■■■■□ 3.81
Shroom2A2ALU4 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC38.86■■■■□ 3.81
Shroom2A2ALU4 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC38.86■■■■□ 3.81
Shroom2A2ALU4 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC38.86■■■■□ 3.81
Shroom2A2ALU4 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC38.83■■■■□ 3.81
Shroom2A2ALU4 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC38.8■■■■□ 3.8
Shroom2A2ALU4 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC38.8■■■■□ 3.8
Shroom2A2ALU4 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC38.8■■■■□ 3.8
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms