Protein–RNA interactions for Protein: A0A140T8P4

Igkv3-9, Immunoglobulin kappa variable 3-9 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-9A0A140T8P4 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Igkv3-9A0A140T8P4 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Igkv3-9A0A140T8P4 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Igkv3-9A0A140T8P4 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Igkv3-9A0A140T8P4 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Igkv3-9A0A140T8P4 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Igkv3-9A0A140T8P4 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Igkv3-9A0A140T8P4 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Igkv3-9A0A140T8P4 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Igkv3-9A0A140T8P4 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Igkv3-9A0A140T8P4 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Igkv3-9A0A140T8P4 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Igkv3-9A0A140T8P4 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Igkv3-9A0A140T8P4 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Igkv3-9A0A140T8P4 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Igkv3-9A0A140T8P4 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Igkv3-9A0A140T8P4 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Igkv3-9A0A140T8P4 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Igkv3-9A0A140T8P4 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Igkv3-9A0A140T8P4 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC16.28■□□□□ 0.2
Igkv3-9A0A140T8P4 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Igkv3-9A0A140T8P4 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Igkv3-9A0A140T8P4 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC16.27■□□□□ 0.2
Igkv3-9A0A140T8P4 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Igkv3-9A0A140T8P4 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Igkv3-9A0A140T8P4 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Igkv3-9A0A140T8P4 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
Igkv3-9A0A140T8P4 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Igkv3-9A0A140T8P4 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Igkv3-9A0A140T8P4 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Igkv3-9A0A140T8P4 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Igkv3-9A0A140T8P4 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Igkv3-9A0A140T8P4 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Igkv3-9A0A140T8P4 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Igkv3-9A0A140T8P4 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
Igkv3-9A0A140T8P4 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Igkv3-9A0A140T8P4 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Igkv3-9A0A140T8P4 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Igkv3-9A0A140T8P4 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Igkv3-9A0A140T8P4 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Igkv3-9A0A140T8P4 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Igkv3-9A0A140T8P4 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Igkv3-9A0A140T8P4 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Igkv3-9A0A140T8P4 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Igkv3-9A0A140T8P4 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Igkv3-9A0A140T8P4 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Igkv3-9A0A140T8P4 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Igkv3-9A0A140T8P4 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Igkv3-9A0A140T8P4 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Igkv3-9A0A140T8P4 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.18
Igkv3-9A0A140T8P4 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Igkv3-9A0A140T8P4 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC16.2■□□□□ 0.18
Igkv3-9A0A140T8P4 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC16.2■□□□□ 0.18
Igkv3-9A0A140T8P4 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Igkv3-9A0A140T8P4 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Igkv3-9A0A140T8P4 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC16.19■□□□□ 0.18
Igkv3-9A0A140T8P4 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Igkv3-9A0A140T8P4 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Igkv3-9A0A140T8P4 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Igkv3-9A0A140T8P4 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Igkv3-9A0A140T8P4 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Igkv3-9A0A140T8P4 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Igkv3-9A0A140T8P4 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Igkv3-9A0A140T8P4 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Igkv3-9A0A140T8P4 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Igkv3-9A0A140T8P4 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Igkv3-9A0A140T8P4 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Igkv3-9A0A140T8P4 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Igkv3-9A0A140T8P4 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Igkv3-9A0A140T8P4 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Igkv3-9A0A140T8P4 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Igkv3-9A0A140T8P4 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Igkv3-9A0A140T8P4 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Igkv3-9A0A140T8P4 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Igkv3-9A0A140T8P4 AC124392.1-201ENSMUST00000225172 5324 ntBASIC16.15■□□□□ 0.18
Igkv3-9A0A140T8P4 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Igkv3-9A0A140T8P4 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Igkv3-9A0A140T8P4 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Igkv3-9A0A140T8P4 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Igkv3-9A0A140T8P4 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Igkv3-9A0A140T8P4 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Igkv3-9A0A140T8P4 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC16.15■□□□□ 0.18
Igkv3-9A0A140T8P4 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Igkv3-9A0A140T8P4 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Igkv3-9A0A140T8P4 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Igkv3-9A0A140T8P4 Gm30023-201ENSMUST00000197970 889 ntBASIC16.14■□□□□ 0.17
Igkv3-9A0A140T8P4 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Igkv3-9A0A140T8P4 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Igkv3-9A0A140T8P4 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Igkv3-9A0A140T8P4 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Igkv3-9A0A140T8P4 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Igkv3-9A0A140T8P4 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC16.13■□□□□ 0.17
Igkv3-9A0A140T8P4 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Igkv3-9A0A140T8P4 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Igkv3-9A0A140T8P4 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC16.13■□□□□ 0.17
Igkv3-9A0A140T8P4 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Igkv3-9A0A140T8P4 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Igkv3-9A0A140T8P4 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Igkv3-9A0A140T8P4 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Igkv3-9A0A140T8P4 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms