Protein–RNA interactions for Protein: A0A140T8N6

Trbv13-2, T cell receptor beta, variable 13-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-2A0A140T8N6 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Trbv13-2A0A140T8N6 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv13-2A0A140T8N6 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Trbv13-2A0A140T8N6 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC16.34■□□□□ 0.21
Trbv13-2A0A140T8N6 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv13-2A0A140T8N6 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv13-2A0A140T8N6 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trbv13-2A0A140T8N6 Gm6821-201ENSMUST00000107540 542 ntBASIC16.33■□□□□ 0.2
Trbv13-2A0A140T8N6 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC16.33■□□□□ 0.2
Trbv13-2A0A140T8N6 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv13-2A0A140T8N6 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv13-2A0A140T8N6 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC16.31■□□□□ 0.2
Trbv13-2A0A140T8N6 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv13-2A0A140T8N6 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv13-2A0A140T8N6 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv13-2A0A140T8N6 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv13-2A0A140T8N6 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC16.3■□□□□ 0.2
Trbv13-2A0A140T8N6 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv13-2A0A140T8N6 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv13-2A0A140T8N6 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC16.29■□□□□ 0.2
Trbv13-2A0A140T8N6 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv13-2A0A140T8N6 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Trbv13-2A0A140T8N6 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC16.29■□□□□ 0.2
Trbv13-2A0A140T8N6 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv13-2A0A140T8N6 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Trbv13-2A0A140T8N6 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv13-2A0A140T8N6 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv13-2A0A140T8N6 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv13-2A0A140T8N6 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv13-2A0A140T8N6 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv13-2A0A140T8N6 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC16.27■□□□□ 0.2
Trbv13-2A0A140T8N6 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Trbv13-2A0A140T8N6 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv13-2A0A140T8N6 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv13-2A0A140T8N6 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv13-2A0A140T8N6 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC16.27■□□□□ 0.2
Trbv13-2A0A140T8N6 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trbv13-2A0A140T8N6 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trbv13-2A0A140T8N6 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trbv13-2A0A140T8N6 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv13-2A0A140T8N6 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv13-2A0A140T8N6 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv13-2A0A140T8N6 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC16.25■□□□□ 0.19
Trbv13-2A0A140T8N6 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC16.25■□□□□ 0.19
Trbv13-2A0A140T8N6 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC16.25■□□□□ 0.19
Trbv13-2A0A140T8N6 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv13-2A0A140T8N6 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Trbv13-2A0A140T8N6 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv13-2A0A140T8N6 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv13-2A0A140T8N6 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC16.24■□□□□ 0.19
Trbv13-2A0A140T8N6 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv13-2A0A140T8N6 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv13-2A0A140T8N6 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv13-2A0A140T8N6 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv13-2A0A140T8N6 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv13-2A0A140T8N6 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Trbv13-2A0A140T8N6 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv13-2A0A140T8N6 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Trbv13-2A0A140T8N6 Gm8503-201ENSMUST00000118131 455 ntBASIC16.22■□□□□ 0.19
Trbv13-2A0A140T8N6 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trbv13-2A0A140T8N6 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv13-2A0A140T8N6 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trbv13-2A0A140T8N6 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv13-2A0A140T8N6 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv13-2A0A140T8N6 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC16.19■□□□□ 0.18
Trbv13-2A0A140T8N6 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC16.19■□□□□ 0.18
Trbv13-2A0A140T8N6 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv13-2A0A140T8N6 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv13-2A0A140T8N6 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv13-2A0A140T8N6 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv13-2A0A140T8N6 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC16.18■□□□□ 0.18
Trbv13-2A0A140T8N6 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC16.18■□□□□ 0.18
Trbv13-2A0A140T8N6 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv13-2A0A140T8N6 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC16.18■□□□□ 0.18
Trbv13-2A0A140T8N6 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv13-2A0A140T8N6 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv13-2A0A140T8N6 Gm37847-201ENSMUST00000192163 1497 ntBASIC16.17■□□□□ 0.18
Trbv13-2A0A140T8N6 Gm31748-201ENSMUST00000194938 1497 ntBASIC16.17■□□□□ 0.18
Trbv13-2A0A140T8N6 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC16.17■□□□□ 0.18
Trbv13-2A0A140T8N6 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Trbv13-2A0A140T8N6 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv13-2A0A140T8N6 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv13-2A0A140T8N6 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Trbv13-2A0A140T8N6 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv13-2A0A140T8N6 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Trbv13-2A0A140T8N6 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Trbv13-2A0A140T8N6 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Trbv13-2A0A140T8N6 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv13-2A0A140T8N6 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv13-2A0A140T8N6 AC122428.3-201ENSMUST00000215551 2290 ntBASIC16.14■□□□□ 0.17
Trbv13-2A0A140T8N6 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv13-2A0A140T8N6 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC16.13■□□□□ 0.17
Trbv13-2A0A140T8N6 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv13-2A0A140T8N6 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
Trbv13-2A0A140T8N6 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv13-2A0A140T8N6 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Trbv13-2A0A140T8N6 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv13-2A0A140T8N6 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Trbv13-2A0A140T8N6 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv13-2A0A140T8N6 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms