Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Igkv1-88A0A140T8N1 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Igkv1-88A0A140T8N1 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Igkv1-88A0A140T8N1 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Igkv1-88A0A140T8N1 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Igkv1-88A0A140T8N1 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Igkv1-88A0A140T8N1 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Igkv1-88A0A140T8N1 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC15.44■□□□□ 0.06
Igkv1-88A0A140T8N1 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Igkv1-88A0A140T8N1 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Igkv1-88A0A140T8N1 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Igkv1-88A0A140T8N1 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Igkv1-88A0A140T8N1 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC15.43■□□□□ 0.06
Igkv1-88A0A140T8N1 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Igkv1-88A0A140T8N1 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC15.42■□□□□ 0.06
Igkv1-88A0A140T8N1 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Igkv1-88A0A140T8N1 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Igkv1-88A0A140T8N1 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Igkv1-88A0A140T8N1 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Igkv1-88A0A140T8N1 Pcf11-205ENSMUST00000208255 1720 ntBASIC15.41■□□□□ 0.06
Igkv1-88A0A140T8N1 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Igkv1-88A0A140T8N1 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Igkv1-88A0A140T8N1 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Igkv1-88A0A140T8N1 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC15.4■□□□□ 0.06
Igkv1-88A0A140T8N1 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Igkv1-88A0A140T8N1 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Igkv1-88A0A140T8N1 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Igkv1-88A0A140T8N1 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Igkv1-88A0A140T8N1 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Igkv1-88A0A140T8N1 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.06
Igkv1-88A0A140T8N1 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Igkv1-88A0A140T8N1 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Igkv1-88A0A140T8N1 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Igkv1-88A0A140T8N1 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Igkv1-88A0A140T8N1 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Igkv1-88A0A140T8N1 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC15.38■□□□□ 0.05
Igkv1-88A0A140T8N1 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Igkv1-88A0A140T8N1 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Igkv1-88A0A140T8N1 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC15.38■□□□□ 0.05
Igkv1-88A0A140T8N1 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Igkv1-88A0A140T8N1 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Igkv1-88A0A140T8N1 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Igkv1-88A0A140T8N1 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Igkv1-88A0A140T8N1 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Igkv1-88A0A140T8N1 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Igkv1-88A0A140T8N1 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Igkv1-88A0A140T8N1 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Igkv1-88A0A140T8N1 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Igkv1-88A0A140T8N1 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC15.36■□□□□ 0.05
Igkv1-88A0A140T8N1 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Igkv1-88A0A140T8N1 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Igkv1-88A0A140T8N1 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Igkv1-88A0A140T8N1 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Igkv1-88A0A140T8N1 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Igkv1-88A0A140T8N1 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Igkv1-88A0A140T8N1 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Igkv1-88A0A140T8N1 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Igkv1-88A0A140T8N1 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Igkv1-88A0A140T8N1 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Igkv1-88A0A140T8N1 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC15.34■□□□□ 0.05
Igkv1-88A0A140T8N1 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Igkv1-88A0A140T8N1 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Igkv1-88A0A140T8N1 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
Igkv1-88A0A140T8N1 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Igkv1-88A0A140T8N1 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC15.33■□□□□ 0.04
Igkv1-88A0A140T8N1 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Igkv1-88A0A140T8N1 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Igkv1-88A0A140T8N1 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Igkv1-88A0A140T8N1 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Igkv1-88A0A140T8N1 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Igkv1-88A0A140T8N1 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Igkv1-88A0A140T8N1 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Igkv1-88A0A140T8N1 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Igkv1-88A0A140T8N1 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
Igkv1-88A0A140T8N1 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Igkv1-88A0A140T8N1 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Igkv1-88A0A140T8N1 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Igkv1-88A0A140T8N1 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Igkv1-88A0A140T8N1 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Igkv1-88A0A140T8N1 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Igkv1-88A0A140T8N1 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Igkv1-88A0A140T8N1 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Igkv1-88A0A140T8N1 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Igkv1-88A0A140T8N1 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Igkv1-88A0A140T8N1 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Igkv1-88A0A140T8N1 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Igkv1-88A0A140T8N1 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Igkv1-88A0A140T8N1 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Igkv1-88A0A140T8N1 AC122428.3-201ENSMUST00000215551 2290 ntBASIC15.27■□□□□ 0.04
Igkv1-88A0A140T8N1 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Igkv1-88A0A140T8N1 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Igkv1-88A0A140T8N1 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Igkv1-88A0A140T8N1 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Igkv1-88A0A140T8N1 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Igkv1-88A0A140T8N1 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Igkv1-88A0A140T8N1 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Igkv1-88A0A140T8N1 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Igkv1-88A0A140T8N1 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC15.26■□□□□ 0.03
Igkv1-88A0A140T8N1 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Igkv1-88A0A140T8N1 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms