Protein–RNA interactions for Protein: A0A140T8M6

Igkv3-5, Immunoglobulin kappa chain variable 3-5 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-5A0A140T8M6 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Igkv3-5A0A140T8M6 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Igkv3-5A0A140T8M6 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Igkv3-5A0A140T8M6 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Igkv3-5A0A140T8M6 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC14.81□□□□□ -0.04
Igkv3-5A0A140T8M6 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Igkv3-5A0A140T8M6 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Igkv3-5A0A140T8M6 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Igkv3-5A0A140T8M6 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Igkv3-5A0A140T8M6 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Igkv3-5A0A140T8M6 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Igkv3-5A0A140T8M6 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Igkv3-5A0A140T8M6 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Igkv3-5A0A140T8M6 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Igkv3-5A0A140T8M6 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Igkv3-5A0A140T8M6 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Igkv3-5A0A140T8M6 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Igkv3-5A0A140T8M6 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Igkv3-5A0A140T8M6 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Igkv3-5A0A140T8M6 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Igkv3-5A0A140T8M6 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Igkv3-5A0A140T8M6 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Igkv3-5A0A140T8M6 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Igkv3-5A0A140T8M6 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Igkv3-5A0A140T8M6 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Igkv3-5A0A140T8M6 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Igkv3-5A0A140T8M6 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Igkv3-5A0A140T8M6 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Igkv3-5A0A140T8M6 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Igkv3-5A0A140T8M6 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC14.76□□□□□ -0.05
Igkv3-5A0A140T8M6 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Igkv3-5A0A140T8M6 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Igkv3-5A0A140T8M6 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Igkv3-5A0A140T8M6 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Igkv3-5A0A140T8M6 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Igkv3-5A0A140T8M6 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC14.74□□□□□ -0.05
Igkv3-5A0A140T8M6 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC14.74□□□□□ -0.05
Igkv3-5A0A140T8M6 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Igkv3-5A0A140T8M6 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Igkv3-5A0A140T8M6 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Igkv3-5A0A140T8M6 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Igkv3-5A0A140T8M6 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Igkv3-5A0A140T8M6 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Igkv3-5A0A140T8M6 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Igkv3-5A0A140T8M6 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Igkv3-5A0A140T8M6 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Igkv3-5A0A140T8M6 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Igkv3-5A0A140T8M6 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Igkv3-5A0A140T8M6 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Igkv3-5A0A140T8M6 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Igkv3-5A0A140T8M6 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC14.72□□□□□ -0.05
Igkv3-5A0A140T8M6 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC14.72□□□□□ -0.05
Igkv3-5A0A140T8M6 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Igkv3-5A0A140T8M6 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Igkv3-5A0A140T8M6 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Igkv3-5A0A140T8M6 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Igkv3-5A0A140T8M6 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Igkv3-5A0A140T8M6 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Igkv3-5A0A140T8M6 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Igkv3-5A0A140T8M6 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Igkv3-5A0A140T8M6 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Igkv3-5A0A140T8M6 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Igkv3-5A0A140T8M6 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Igkv3-5A0A140T8M6 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Igkv3-5A0A140T8M6 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Igkv3-5A0A140T8M6 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC14.7□□□□□ -0.06
Igkv3-5A0A140T8M6 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
Igkv3-5A0A140T8M6 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Igkv3-5A0A140T8M6 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Igkv3-5A0A140T8M6 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Igkv3-5A0A140T8M6 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Igkv3-5A0A140T8M6 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Igkv3-5A0A140T8M6 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Igkv3-5A0A140T8M6 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Igkv3-5A0A140T8M6 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Igkv3-5A0A140T8M6 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Igkv3-5A0A140T8M6 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Igkv3-5A0A140T8M6 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC14.67□□□□□ -0.06
Igkv3-5A0A140T8M6 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Igkv3-5A0A140T8M6 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
Igkv3-5A0A140T8M6 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Igkv3-5A0A140T8M6 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Igkv3-5A0A140T8M6 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Igkv3-5A0A140T8M6 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Igkv3-5A0A140T8M6 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Igkv3-5A0A140T8M6 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Igkv3-5A0A140T8M6 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC14.66□□□□□ -0.06
Igkv3-5A0A140T8M6 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Igkv3-5A0A140T8M6 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC14.65□□□□□ -0.06
Igkv3-5A0A140T8M6 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Igkv3-5A0A140T8M6 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Igkv3-5A0A140T8M6 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Igkv3-5A0A140T8M6 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Igkv3-5A0A140T8M6 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Igkv3-5A0A140T8M6 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Igkv3-5A0A140T8M6 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Igkv3-5A0A140T8M6 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Igkv3-5A0A140T8M6 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Igkv3-5A0A140T8M6 Gm43863-201ENSMUST00000203822 1192 ntBASIC14.62□□□□□ -0.07
Igkv3-5A0A140T8M6 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms