Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav9d-4A0A0G2JG37 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Trav9d-4A0A0G2JG37 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav9d-4A0A0G2JG37 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC16.01■□□□□ 0.15
Trav9d-4A0A0G2JG37 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trav9d-4A0A0G2JG37 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav9d-4A0A0G2JG37 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Trav9d-4A0A0G2JG37 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav9d-4A0A0G2JG37 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav9d-4A0A0G2JG37 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav9d-4A0A0G2JG37 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav9d-4A0A0G2JG37 AC122428.3-201ENSMUST00000215551 2290 ntBASIC15.99■□□□□ 0.15
Trav9d-4A0A0G2JG37 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Trav9d-4A0A0G2JG37 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav9d-4A0A0G2JG37 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav9d-4A0A0G2JG37 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav9d-4A0A0G2JG37 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Trav9d-4A0A0G2JG37 Pcf11-205ENSMUST00000208255 1720 ntBASIC15.98■□□□□ 0.15
Trav9d-4A0A0G2JG37 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav9d-4A0A0G2JG37 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Trav9d-4A0A0G2JG37 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav9d-4A0A0G2JG37 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Trav9d-4A0A0G2JG37 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Trav9d-4A0A0G2JG37 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav9d-4A0A0G2JG37 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav9d-4A0A0G2JG37 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav9d-4A0A0G2JG37 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav9d-4A0A0G2JG37 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav9d-4A0A0G2JG37 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav9d-4A0A0G2JG37 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav9d-4A0A0G2JG37 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav9d-4A0A0G2JG37 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav9d-4A0A0G2JG37 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav9d-4A0A0G2JG37 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC15.96■□□□□ 0.14
Trav9d-4A0A0G2JG37 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Trav9d-4A0A0G2JG37 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Trav9d-4A0A0G2JG37 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav9d-4A0A0G2JG37 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav9d-4A0A0G2JG37 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav9d-4A0A0G2JG37 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav9d-4A0A0G2JG37 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav9d-4A0A0G2JG37 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav9d-4A0A0G2JG37 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav9d-4A0A0G2JG37 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav9d-4A0A0G2JG37 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav9d-4A0A0G2JG37 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav9d-4A0A0G2JG37 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav9d-4A0A0G2JG37 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav9d-4A0A0G2JG37 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Trav9d-4A0A0G2JG37 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav9d-4A0A0G2JG37 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav9d-4A0A0G2JG37 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Trav9d-4A0A0G2JG37 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav9d-4A0A0G2JG37 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav9d-4A0A0G2JG37 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav9d-4A0A0G2JG37 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav9d-4A0A0G2JG37 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav9d-4A0A0G2JG37 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav9d-4A0A0G2JG37 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Trav9d-4A0A0G2JG37 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav9d-4A0A0G2JG37 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC15.89■□□□□ 0.13
Trav9d-4A0A0G2JG37 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav9d-4A0A0G2JG37 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav9d-4A0A0G2JG37 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav9d-4A0A0G2JG37 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav9d-4A0A0G2JG37 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav9d-4A0A0G2JG37 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Trav9d-4A0A0G2JG37 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC15.88■□□□□ 0.13
Trav9d-4A0A0G2JG37 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav9d-4A0A0G2JG37 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav9d-4A0A0G2JG37 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav9d-4A0A0G2JG37 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Trav9d-4A0A0G2JG37 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav9d-4A0A0G2JG37 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav9d-4A0A0G2JG37 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav9d-4A0A0G2JG37 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav9d-4A0A0G2JG37 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav9d-4A0A0G2JG37 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav9d-4A0A0G2JG37 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav9d-4A0A0G2JG37 Il17rd-202ENSMUST00000223942 2186 ntBASIC15.85■□□□□ 0.13
Trav9d-4A0A0G2JG37 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav9d-4A0A0G2JG37 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav9d-4A0A0G2JG37 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC15.85■□□□□ 0.13
Trav9d-4A0A0G2JG37 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Trav9d-4A0A0G2JG37 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav9d-4A0A0G2JG37 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav9d-4A0A0G2JG37 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav9d-4A0A0G2JG37 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav9d-4A0A0G2JG37 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav9d-4A0A0G2JG37 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Trav9d-4A0A0G2JG37 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC15.84■□□□□ 0.13
Trav9d-4A0A0G2JG37 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav9d-4A0A0G2JG37 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Trav9d-4A0A0G2JG37 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav9d-4A0A0G2JG37 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav9d-4A0A0G2JG37 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav9d-4A0A0G2JG37 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC15.83■□□□□ 0.12
Trav9d-4A0A0G2JG37 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav9d-4A0A0G2JG37 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav9d-4A0A0G2JG37 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms