Protein–RNA interactions for Protein: A0A0G2JFC6

Igkv4-53, Immunoglobulin kappa variable 4-53 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-53A0A0G2JFC6 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Igkv4-53A0A0G2JFC6 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Igkv4-53A0A0G2JFC6 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Igkv4-53A0A0G2JFC6 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Igkv4-53A0A0G2JFC6 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Igkv4-53A0A0G2JFC6 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Igkv4-53A0A0G2JFC6 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Igkv4-53A0A0G2JFC6 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Igkv4-53A0A0G2JFC6 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC16.55■□□□□ 0.24
Igkv4-53A0A0G2JFC6 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC16.55■□□□□ 0.24
Igkv4-53A0A0G2JFC6 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Igkv4-53A0A0G2JFC6 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Igkv4-53A0A0G2JFC6 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Igkv4-53A0A0G2JFC6 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Igkv4-53A0A0G2JFC6 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Igkv4-53A0A0G2JFC6 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Igkv4-53A0A0G2JFC6 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Igkv4-53A0A0G2JFC6 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Igkv4-53A0A0G2JFC6 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Igkv4-53A0A0G2JFC6 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Igkv4-53A0A0G2JFC6 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Igkv4-53A0A0G2JFC6 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC16.52■□□□□ 0.24
Igkv4-53A0A0G2JFC6 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Igkv4-53A0A0G2JFC6 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Igkv4-53A0A0G2JFC6 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
Igkv4-53A0A0G2JFC6 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Igkv4-53A0A0G2JFC6 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Igkv4-53A0A0G2JFC6 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Igkv4-53A0A0G2JFC6 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Igkv4-53A0A0G2JFC6 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Igkv4-53A0A0G2JFC6 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Igkv4-53A0A0G2JFC6 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Igkv4-53A0A0G2JFC6 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Igkv4-53A0A0G2JFC6 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Igkv4-53A0A0G2JFC6 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC16.49■□□□□ 0.23
Igkv4-53A0A0G2JFC6 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Igkv4-53A0A0G2JFC6 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Igkv4-53A0A0G2JFC6 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Igkv4-53A0A0G2JFC6 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Igkv4-53A0A0G2JFC6 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Igkv4-53A0A0G2JFC6 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Igkv4-53A0A0G2JFC6 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Igkv4-53A0A0G2JFC6 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Igkv4-53A0A0G2JFC6 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Igkv4-53A0A0G2JFC6 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Igkv4-53A0A0G2JFC6 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Igkv4-53A0A0G2JFC6 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Igkv4-53A0A0G2JFC6 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Igkv4-53A0A0G2JFC6 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
Igkv4-53A0A0G2JFC6 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Igkv4-53A0A0G2JFC6 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC16.46■□□□□ 0.23
Igkv4-53A0A0G2JFC6 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
Igkv4-53A0A0G2JFC6 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Igkv4-53A0A0G2JFC6 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Igkv4-53A0A0G2JFC6 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Igkv4-53A0A0G2JFC6 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Igkv4-53A0A0G2JFC6 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
Igkv4-53A0A0G2JFC6 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Igkv4-53A0A0G2JFC6 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Igkv4-53A0A0G2JFC6 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Igkv4-53A0A0G2JFC6 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv4-53A0A0G2JFC6 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv4-53A0A0G2JFC6 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv4-53A0A0G2JFC6 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv4-53A0A0G2JFC6 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv4-53A0A0G2JFC6 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv4-53A0A0G2JFC6 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv4-53A0A0G2JFC6 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv4-53A0A0G2JFC6 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Igkv4-53A0A0G2JFC6 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Igkv4-53A0A0G2JFC6 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Igkv4-53A0A0G2JFC6 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Igkv4-53A0A0G2JFC6 Gm30023-201ENSMUST00000197970 889 ntBASIC16.41■□□□□ 0.22
Igkv4-53A0A0G2JFC6 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Igkv4-53A0A0G2JFC6 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Igkv4-53A0A0G2JFC6 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Igkv4-53A0A0G2JFC6 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Igkv4-53A0A0G2JFC6 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC16.4■□□□□ 0.22
Igkv4-53A0A0G2JFC6 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Igkv4-53A0A0G2JFC6 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Igkv4-53A0A0G2JFC6 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Igkv4-53A0A0G2JFC6 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Igkv4-53A0A0G2JFC6 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Igkv4-53A0A0G2JFC6 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Igkv4-53A0A0G2JFC6 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Igkv4-53A0A0G2JFC6 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Igkv4-53A0A0G2JFC6 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Igkv4-53A0A0G2JFC6 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Igkv4-53A0A0G2JFC6 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Igkv4-53A0A0G2JFC6 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Igkv4-53A0A0G2JFC6 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Igkv4-53A0A0G2JFC6 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC16.38■□□□□ 0.21
Igkv4-53A0A0G2JFC6 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Igkv4-53A0A0G2JFC6 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Igkv4-53A0A0G2JFC6 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Igkv4-53A0A0G2JFC6 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Igkv4-53A0A0G2JFC6 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC16.37■□□□□ 0.21
Igkv4-53A0A0G2JFC6 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Igkv4-53A0A0G2JFC6 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Igkv4-53A0A0G2JFC6 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 10.1 ms