Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav3n-3A0A0G2JEM0 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav3n-3A0A0G2JEM0 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav3n-3A0A0G2JEM0 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav3n-3A0A0G2JEM0 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC17.66■□□□□ 0.42
Trav3n-3A0A0G2JEM0 Gm8109-201ENSMUST00000194076 746 ntBASIC17.66■□□□□ 0.42
Trav3n-3A0A0G2JEM0 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav3n-3A0A0G2JEM0 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav3n-3A0A0G2JEM0 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav3n-3A0A0G2JEM0 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav3n-3A0A0G2JEM0 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trav3n-3A0A0G2JEM0 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
Trav3n-3A0A0G2JEM0 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trav3n-3A0A0G2JEM0 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Trav3n-3A0A0G2JEM0 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Trav3n-3A0A0G2JEM0 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav3n-3A0A0G2JEM0 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trav3n-3A0A0G2JEM0 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trav3n-3A0A0G2JEM0 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC17.63■□□□□ 0.41
Trav3n-3A0A0G2JEM0 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trav3n-3A0A0G2JEM0 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav3n-3A0A0G2JEM0 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav3n-3A0A0G2JEM0 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
Trav3n-3A0A0G2JEM0 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
Trav3n-3A0A0G2JEM0 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trav3n-3A0A0G2JEM0 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav3n-3A0A0G2JEM0 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav3n-3A0A0G2JEM0 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Trav3n-3A0A0G2JEM0 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
Trav3n-3A0A0G2JEM0 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Trav3n-3A0A0G2JEM0 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav3n-3A0A0G2JEM0 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trav3n-3A0A0G2JEM0 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trav3n-3A0A0G2JEM0 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Trav3n-3A0A0G2JEM0 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav3n-3A0A0G2JEM0 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trav3n-3A0A0G2JEM0 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC17.59■□□□□ 0.41
Trav3n-3A0A0G2JEM0 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav3n-3A0A0G2JEM0 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav3n-3A0A0G2JEM0 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.57■□□□□ 0.4
Trav3n-3A0A0G2JEM0 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav3n-3A0A0G2JEM0 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trav3n-3A0A0G2JEM0 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav3n-3A0A0G2JEM0 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav3n-3A0A0G2JEM0 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Trav3n-3A0A0G2JEM0 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Trav3n-3A0A0G2JEM0 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav3n-3A0A0G2JEM0 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
Trav3n-3A0A0G2JEM0 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav3n-3A0A0G2JEM0 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav3n-3A0A0G2JEM0 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC17.56■□□□□ 0.4
Trav3n-3A0A0G2JEM0 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Trav3n-3A0A0G2JEM0 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav3n-3A0A0G2JEM0 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trav3n-3A0A0G2JEM0 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav3n-3A0A0G2JEM0 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC17.55■□□□□ 0.4
Trav3n-3A0A0G2JEM0 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav3n-3A0A0G2JEM0 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC17.54■□□□□ 0.4
Trav3n-3A0A0G2JEM0 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav3n-3A0A0G2JEM0 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav3n-3A0A0G2JEM0 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav3n-3A0A0G2JEM0 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav3n-3A0A0G2JEM0 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trav3n-3A0A0G2JEM0 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Trav3n-3A0A0G2JEM0 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC17.52■□□□□ 0.4
Trav3n-3A0A0G2JEM0 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav3n-3A0A0G2JEM0 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav3n-3A0A0G2JEM0 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trav3n-3A0A0G2JEM0 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trav3n-3A0A0G2JEM0 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.51■□□□□ 0.39
Trav3n-3A0A0G2JEM0 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav3n-3A0A0G2JEM0 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Trav3n-3A0A0G2JEM0 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav3n-3A0A0G2JEM0 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav3n-3A0A0G2JEM0 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav3n-3A0A0G2JEM0 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trav3n-3A0A0G2JEM0 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav3n-3A0A0G2JEM0 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav3n-3A0A0G2JEM0 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Trav3n-3A0A0G2JEM0 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav3n-3A0A0G2JEM0 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav3n-3A0A0G2JEM0 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav3n-3A0A0G2JEM0 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Trav3n-3A0A0G2JEM0 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav3n-3A0A0G2JEM0 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav3n-3A0A0G2JEM0 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Trav3n-3A0A0G2JEM0 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav3n-3A0A0G2JEM0 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC17.47■□□□□ 0.39
Trav3n-3A0A0G2JEM0 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC17.47■□□□□ 0.39
Trav3n-3A0A0G2JEM0 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav3n-3A0A0G2JEM0 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC17.47■□□□□ 0.39
Trav3n-3A0A0G2JEM0 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trav3n-3A0A0G2JEM0 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Trav3n-3A0A0G2JEM0 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav3n-3A0A0G2JEM0 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav3n-3A0A0G2JEM0 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trav3n-3A0A0G2JEM0 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav3n-3A0A0G2JEM0 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav3n-3A0A0G2JEM0 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Trav3n-3A0A0G2JEM0 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms