Protein–RNA interactions for Protein: A0A0C4DH25

IGKV3D-20, Immunoglobulin kappa variable 3D-20, humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-20A0A0C4DH25 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
IGKV3D-20A0A0C4DH25 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
IGKV3D-20A0A0C4DH25 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC18.96■□□□□ 0.63
IGKV3D-20A0A0C4DH25 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
IGKV3D-20A0A0C4DH25 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
IGKV3D-20A0A0C4DH25 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC18.96■□□□□ 0.63
IGKV3D-20A0A0C4DH25 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
IGKV3D-20A0A0C4DH25 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC18.96■□□□□ 0.63
IGKV3D-20A0A0C4DH25 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
IGKV3D-20A0A0C4DH25 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
IGKV3D-20A0A0C4DH25 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
IGKV3D-20A0A0C4DH25 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
IGKV3D-20A0A0C4DH25 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC18.95■□□□□ 0.62
IGKV3D-20A0A0C4DH25 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC18.95■□□□□ 0.62
IGKV3D-20A0A0C4DH25 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC18.95■□□□□ 0.62
IGKV3D-20A0A0C4DH25 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
IGKV3D-20A0A0C4DH25 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
IGKV3D-20A0A0C4DH25 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
IGKV3D-20A0A0C4DH25 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
IGKV3D-20A0A0C4DH25 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC18.94■□□□□ 0.62
IGKV3D-20A0A0C4DH25 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
IGKV3D-20A0A0C4DH25 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
IGKV3D-20A0A0C4DH25 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
IGKV3D-20A0A0C4DH25 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
IGKV3D-20A0A0C4DH25 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
IGKV3D-20A0A0C4DH25 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
IGKV3D-20A0A0C4DH25 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC18.93■□□□□ 0.62
IGKV3D-20A0A0C4DH25 SHF-208ENST00000560734 1731 ntTSL 3 BASIC18.93■□□□□ 0.62
IGKV3D-20A0A0C4DH25 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
IGKV3D-20A0A0C4DH25 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
IGKV3D-20A0A0C4DH25 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
IGKV3D-20A0A0C4DH25 AC127502.1-201ENST00000399971 1502 ntBASIC18.92■□□□□ 0.62
IGKV3D-20A0A0C4DH25 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
IGKV3D-20A0A0C4DH25 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
IGKV3D-20A0A0C4DH25 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
IGKV3D-20A0A0C4DH25 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
IGKV3D-20A0A0C4DH25 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
IGKV3D-20A0A0C4DH25 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
IGKV3D-20A0A0C4DH25 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
IGKV3D-20A0A0C4DH25 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
IGKV3D-20A0A0C4DH25 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
IGKV3D-20A0A0C4DH25 LINC01003-201ENST00000564834 1764 ntBASIC18.9■□□□□ 0.62
IGKV3D-20A0A0C4DH25 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
IGKV3D-20A0A0C4DH25 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
IGKV3D-20A0A0C4DH25 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
IGKV3D-20A0A0C4DH25 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
IGKV3D-20A0A0C4DH25 SETD8P1-201ENST00000623146 1180 ntBASIC18.89■□□□□ 0.61
IGKV3D-20A0A0C4DH25 SHF-207ENST00000560540 2062 ntTSL 5 BASIC18.89■□□□□ 0.61
IGKV3D-20A0A0C4DH25 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
IGKV3D-20A0A0C4DH25 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
IGKV3D-20A0A0C4DH25 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
IGKV3D-20A0A0C4DH25 RARRES2P7-201ENST00000567349 469 ntBASIC18.88■□□□□ 0.61
IGKV3D-20A0A0C4DH25 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
IGKV3D-20A0A0C4DH25 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
IGKV3D-20A0A0C4DH25 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
IGKV3D-20A0A0C4DH25 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
IGKV3D-20A0A0C4DH25 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
IGKV3D-20A0A0C4DH25 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
IGKV3D-20A0A0C4DH25 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
IGKV3D-20A0A0C4DH25 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
IGKV3D-20A0A0C4DH25 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
IGKV3D-20A0A0C4DH25 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
IGKV3D-20A0A0C4DH25 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
IGKV3D-20A0A0C4DH25 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
IGKV3D-20A0A0C4DH25 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC18.86■□□□□ 0.61
IGKV3D-20A0A0C4DH25 DENR-202ENST00000455982 1052 ntTSL 5 BASIC18.86■□□□□ 0.61
IGKV3D-20A0A0C4DH25 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
IGKV3D-20A0A0C4DH25 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
IGKV3D-20A0A0C4DH25 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC18.86■□□□□ 0.61
IGKV3D-20A0A0C4DH25 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC18.86■□□□□ 0.61
IGKV3D-20A0A0C4DH25 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC18.85■□□□□ 0.61
IGKV3D-20A0A0C4DH25 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
IGKV3D-20A0A0C4DH25 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC18.85■□□□□ 0.61
IGKV3D-20A0A0C4DH25 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
IGKV3D-20A0A0C4DH25 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC18.84■□□□□ 0.61
IGKV3D-20A0A0C4DH25 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
IGKV3D-20A0A0C4DH25 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
IGKV3D-20A0A0C4DH25 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
IGKV3D-20A0A0C4DH25 AC100797.4-201ENST00000631653 1827 ntBASIC18.83■□□□□ 0.6
IGKV3D-20A0A0C4DH25 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
IGKV3D-20A0A0C4DH25 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
IGKV3D-20A0A0C4DH25 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC18.82■□□□□ 0.6
IGKV3D-20A0A0C4DH25 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC18.82■□□□□ 0.6
IGKV3D-20A0A0C4DH25 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
IGKV3D-20A0A0C4DH25 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
IGKV3D-20A0A0C4DH25 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
IGKV3D-20A0A0C4DH25 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
IGKV3D-20A0A0C4DH25 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
IGKV3D-20A0A0C4DH25 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
IGKV3D-20A0A0C4DH25 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC18.8■□□□□ 0.6
IGKV3D-20A0A0C4DH25 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
IGKV3D-20A0A0C4DH25 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
IGKV3D-20A0A0C4DH25 EBPL-202ENST00000378268 680 ntTSL 3 BASIC18.8■□□□□ 0.6
IGKV3D-20A0A0C4DH25 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
IGKV3D-20A0A0C4DH25 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC18.8■□□□□ 0.6
IGKV3D-20A0A0C4DH25 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
IGKV3D-20A0A0C4DH25 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
IGKV3D-20A0A0C4DH25 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
IGKV3D-20A0A0C4DH25 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
IGKV3D-20A0A0C4DH25 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms