Protein–RNA interactions for Protein: A0A0B4J240

TRAV10, T-cell receptor alpha variable 10 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV10A0A0B4J240 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV10A0A0B4J240 AC135983.2-203ENST00000454486 1613 ntBASIC18.16■□□□□ 0.5
TRAV10A0A0B4J240 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV10A0A0B4J240 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV10A0A0B4J240 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV10A0A0B4J240 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV10A0A0B4J240 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV10A0A0B4J240 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
TRAV10A0A0B4J240 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV10A0A0B4J240 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC18.14■□□□□ 0.5
TRAV10A0A0B4J240 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TRAV10A0A0B4J240 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV10A0A0B4J240 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC18.14■□□□□ 0.49
TRAV10A0A0B4J240 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV10A0A0B4J240 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV10A0A0B4J240 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC18.14■□□□□ 0.49
TRAV10A0A0B4J240 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV10A0A0B4J240 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
TRAV10A0A0B4J240 AC008813.1-201ENST00000536597 885 ntBASIC18.13■□□□□ 0.49
TRAV10A0A0B4J240 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
TRAV10A0A0B4J240 WHAMMP2-203ENST00000563942 1603 ntBASIC18.12■□□□□ 0.49
TRAV10A0A0B4J240 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
TRAV10A0A0B4J240 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
TRAV10A0A0B4J240 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC18.12■□□□□ 0.49
TRAV10A0A0B4J240 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
TRAV10A0A0B4J240 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV10A0A0B4J240 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC18.12■□□□□ 0.49
TRAV10A0A0B4J240 TPT1-202ENST00000379055 948 ntTSL 2 BASIC18.11■□□□□ 0.49
TRAV10A0A0B4J240 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC18.11■□□□□ 0.49
TRAV10A0A0B4J240 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV10A0A0B4J240 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
TRAV10A0A0B4J240 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV10A0A0B4J240 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV10A0A0B4J240 BRD4-212ENST00000630599 726 ntTSL 2 BASIC18.09■□□□□ 0.49
TRAV10A0A0B4J240 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV10A0A0B4J240 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRAV10A0A0B4J240 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV10A0A0B4J240 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC18.08■□□□□ 0.48
TRAV10A0A0B4J240 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC18.08■□□□□ 0.48
TRAV10A0A0B4J240 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC18.08■□□□□ 0.48
TRAV10A0A0B4J240 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV10A0A0B4J240 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC18.07■□□□□ 0.48
TRAV10A0A0B4J240 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
TRAV10A0A0B4J240 SRP68-213ENST00000629930 165 ntTSL 5 BASIC18.07■□□□□ 0.48
TRAV10A0A0B4J240 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV10A0A0B4J240 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV10A0A0B4J240 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV10A0A0B4J240 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC18.06■□□□□ 0.48
TRAV10A0A0B4J240 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC18.06■□□□□ 0.48
TRAV10A0A0B4J240 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV10A0A0B4J240 AC110285.7-201ENST00000624417 1536 ntBASIC18.06■□□□□ 0.48
TRAV10A0A0B4J240 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV10A0A0B4J240 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV10A0A0B4J240 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC18.05■□□□□ 0.48
TRAV10A0A0B4J240 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV10A0A0B4J240 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC18.05■□□□□ 0.48
TRAV10A0A0B4J240 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV10A0A0B4J240 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV10A0A0B4J240 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC18.04■□□□□ 0.48
TRAV10A0A0B4J240 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
TRAV10A0A0B4J240 MEST-211ENST00000437945 1455 ntTSL 5 BASIC18.04■□□□□ 0.48
TRAV10A0A0B4J240 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC18.04■□□□□ 0.48
TRAV10A0A0B4J240 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV10A0A0B4J240 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV10A0A0B4J240 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV10A0A0B4J240 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV10A0A0B4J240 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC18.03■□□□□ 0.48
TRAV10A0A0B4J240 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC18.03■□□□□ 0.48
TRAV10A0A0B4J240 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC18.03■□□□□ 0.48
TRAV10A0A0B4J240 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV10A0A0B4J240 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV10A0A0B4J240 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
TRAV10A0A0B4J240 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC18.02■□□□□ 0.48
TRAV10A0A0B4J240 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
TRAV10A0A0B4J240 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV10A0A0B4J240 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
TRAV10A0A0B4J240 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV10A0A0B4J240 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC18.01■□□□□ 0.47
TRAV10A0A0B4J240 GPX1-201ENST00000419349 1106 ntBASIC18.01■□□□□ 0.47
TRAV10A0A0B4J240 CEP120-209ENST00000515110 606 ntTSL 3 BASIC18.01■□□□□ 0.47
TRAV10A0A0B4J240 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV10A0A0B4J240 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV10A0A0B4J240 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRAV10A0A0B4J240 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV10A0A0B4J240 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRAV10A0A0B4J240 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV10A0A0B4J240 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV10A0A0B4J240 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV10A0A0B4J240 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV10A0A0B4J240 ST7-AS1-201ENST00000456775 1889 ntBASIC17.99■□□□□ 0.47
TRAV10A0A0B4J240 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
TRAV10A0A0B4J240 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC17.99■□□□□ 0.47
TRAV10A0A0B4J240 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV10A0A0B4J240 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV10A0A0B4J240 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC17.99■□□□□ 0.47
TRAV10A0A0B4J240 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
TRAV10A0A0B4J240 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV10A0A0B4J240 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC17.99■□□□□ 0.47
TRAV10A0A0B4J240 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
TRAV10A0A0B4J240 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms