Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC17.67■□□□□ 0.42
Trav9-4A0A0B4J1K2 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav9-4A0A0B4J1K2 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trav9-4A0A0B4J1K2 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC17.67■□□□□ 0.42
Trav9-4A0A0B4J1K2 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav9-4A0A0B4J1K2 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Trav9-4A0A0B4J1K2 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav9-4A0A0B4J1K2 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC17.65■□□□□ 0.42
Trav9-4A0A0B4J1K2 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trav9-4A0A0B4J1K2 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trav9-4A0A0B4J1K2 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav9-4A0A0B4J1K2 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Trav9-4A0A0B4J1K2 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trav9-4A0A0B4J1K2 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav9-4A0A0B4J1K2 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC17.61■□□□□ 0.41
Trav9-4A0A0B4J1K2 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC17.61■□□□□ 0.41
Trav9-4A0A0B4J1K2 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav9-4A0A0B4J1K2 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trav9-4A0A0B4J1K2 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trav9-4A0A0B4J1K2 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Trav9-4A0A0B4J1K2 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav9-4A0A0B4J1K2 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trav9-4A0A0B4J1K2 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC17.59■□□□□ 0.41
Trav9-4A0A0B4J1K2 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC17.58■□□□□ 0.41
Trav9-4A0A0B4J1K2 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Trav9-4A0A0B4J1K2 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC17.58■□□□□ 0.4
Trav9-4A0A0B4J1K2 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trav9-4A0A0B4J1K2 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trav9-4A0A0B4J1K2 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav9-4A0A0B4J1K2 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trav9-4A0A0B4J1K2 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trav9-4A0A0B4J1K2 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trav9-4A0A0B4J1K2 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav9-4A0A0B4J1K2 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav9-4A0A0B4J1K2 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trav9-4A0A0B4J1K2 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav9-4A0A0B4J1K2 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav9-4A0A0B4J1K2 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Trav9-4A0A0B4J1K2 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav9-4A0A0B4J1K2 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav9-4A0A0B4J1K2 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav9-4A0A0B4J1K2 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC17.54■□□□□ 0.4
Trav9-4A0A0B4J1K2 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav9-4A0A0B4J1K2 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC17.53■□□□□ 0.4
Trav9-4A0A0B4J1K2 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav9-4A0A0B4J1K2 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav9-4A0A0B4J1K2 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav9-4A0A0B4J1K2 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Trav9-4A0A0B4J1K2 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav9-4A0A0B4J1K2 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav9-4A0A0B4J1K2 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav9-4A0A0B4J1K2 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Trav9-4A0A0B4J1K2 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav9-4A0A0B4J1K2 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Trav9-4A0A0B4J1K2 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav9-4A0A0B4J1K2 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trav9-4A0A0B4J1K2 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trav9-4A0A0B4J1K2 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trav9-4A0A0B4J1K2 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Trav9-4A0A0B4J1K2 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav9-4A0A0B4J1K2 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trav9-4A0A0B4J1K2 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav9-4A0A0B4J1K2 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav9-4A0A0B4J1K2 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav9-4A0A0B4J1K2 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav9-4A0A0B4J1K2 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav9-4A0A0B4J1K2 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav9-4A0A0B4J1K2 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trav9-4A0A0B4J1K2 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trav9-4A0A0B4J1K2 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav9-4A0A0B4J1K2 Particl-201ENSMUST00000205370 1560 ntBASIC17.48■□□□□ 0.39
Trav9-4A0A0B4J1K2 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Trav9-4A0A0B4J1K2 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Trav9-4A0A0B4J1K2 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trav9-4A0A0B4J1K2 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav9-4A0A0B4J1K2 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav9-4A0A0B4J1K2 Gm37847-201ENSMUST00000192163 1497 ntBASIC17.46■□□□□ 0.39
Trav9-4A0A0B4J1K2 Gm31748-201ENSMUST00000194938 1497 ntBASIC17.46■□□□□ 0.39
Trav9-4A0A0B4J1K2 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav9-4A0A0B4J1K2 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Trav9-4A0A0B4J1K2 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav9-4A0A0B4J1K2 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Trav9-4A0A0B4J1K2 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav9-4A0A0B4J1K2 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Trav9-4A0A0B4J1K2 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC17.45■□□□□ 0.38
Trav9-4A0A0B4J1K2 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav9-4A0A0B4J1K2 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav9-4A0A0B4J1K2 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav9-4A0A0B4J1K2 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trav9-4A0A0B4J1K2 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Trav9-4A0A0B4J1K2 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav9-4A0A0B4J1K2 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Trav9-4A0A0B4J1K2 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav9-4A0A0B4J1K2 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Trav9-4A0A0B4J1K2 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav9-4A0A0B4J1K2 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav9-4A0A0B4J1K2 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC17.42■□□□□ 0.38
Trav9-4A0A0B4J1K2 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC17.42■□□□□ 0.38
Trav9-4A0A0B4J1K2 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC17.41■□□□□ 0.38
Trav9-4A0A0B4J1K2 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms