Protein–RNA interactions for Protein: A0A0B4J1J8

Tcrg-V4, T cell receptor gamma, variable 4 (Fragment), mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcrg-V4A0A0B4J1J8 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tcrg-V4A0A0B4J1J8 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Tcrg-V4A0A0B4J1J8 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Tcrg-V4A0A0B4J1J8 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tcrg-V4A0A0B4J1J8 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tcrg-V4A0A0B4J1J8 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Tcrg-V4A0A0B4J1J8 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tcrg-V4A0A0B4J1J8 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Tcrg-V4A0A0B4J1J8 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Tcrg-V4A0A0B4J1J8 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tcrg-V4A0A0B4J1J8 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tcrg-V4A0A0B4J1J8 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
Tcrg-V4A0A0B4J1J8 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tcrg-V4A0A0B4J1J8 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tcrg-V4A0A0B4J1J8 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Tcrg-V4A0A0B4J1J8 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tcrg-V4A0A0B4J1J8 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tcrg-V4A0A0B4J1J8 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Tcrg-V4A0A0B4J1J8 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tcrg-V4A0A0B4J1J8 Mipep-204ENSMUST00000225043 1548 ntBASIC17.63■□□□□ 0.41
Tcrg-V4A0A0B4J1J8 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.63■□□□□ 0.41
Tcrg-V4A0A0B4J1J8 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tcrg-V4A0A0B4J1J8 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tcrg-V4A0A0B4J1J8 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Tcrg-V4A0A0B4J1J8 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Tcrg-V4A0A0B4J1J8 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Tcrg-V4A0A0B4J1J8 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tcrg-V4A0A0B4J1J8 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
Tcrg-V4A0A0B4J1J8 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tcrg-V4A0A0B4J1J8 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tcrg-V4A0A0B4J1J8 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Tcrg-V4A0A0B4J1J8 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tcrg-V4A0A0B4J1J8 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tcrg-V4A0A0B4J1J8 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tcrg-V4A0A0B4J1J8 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tcrg-V4A0A0B4J1J8 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Tcrg-V4A0A0B4J1J8 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tcrg-V4A0A0B4J1J8 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Tcrg-V4A0A0B4J1J8 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Tcrg-V4A0A0B4J1J8 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Tcrg-V4A0A0B4J1J8 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tcrg-V4A0A0B4J1J8 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tcrg-V4A0A0B4J1J8 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Tcrg-V4A0A0B4J1J8 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tcrg-V4A0A0B4J1J8 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC17.58■□□□□ 0.4
Tcrg-V4A0A0B4J1J8 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Tcrg-V4A0A0B4J1J8 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tcrg-V4A0A0B4J1J8 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tcrg-V4A0A0B4J1J8 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Tcrg-V4A0A0B4J1J8 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tcrg-V4A0A0B4J1J8 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Tcrg-V4A0A0B4J1J8 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tcrg-V4A0A0B4J1J8 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Tcrg-V4A0A0B4J1J8 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC17.57■□□□□ 0.4
Tcrg-V4A0A0B4J1J8 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tcrg-V4A0A0B4J1J8 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tcrg-V4A0A0B4J1J8 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tcrg-V4A0A0B4J1J8 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tcrg-V4A0A0B4J1J8 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tcrg-V4A0A0B4J1J8 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tcrg-V4A0A0B4J1J8 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.55■□□□□ 0.4
Tcrg-V4A0A0B4J1J8 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tcrg-V4A0A0B4J1J8 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tcrg-V4A0A0B4J1J8 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Tcrg-V4A0A0B4J1J8 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tcrg-V4A0A0B4J1J8 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Tcrg-V4A0A0B4J1J8 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tcrg-V4A0A0B4J1J8 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
Tcrg-V4A0A0B4J1J8 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Tcrg-V4A0A0B4J1J8 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tcrg-V4A0A0B4J1J8 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tcrg-V4A0A0B4J1J8 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Tcrg-V4A0A0B4J1J8 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tcrg-V4A0A0B4J1J8 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tcrg-V4A0A0B4J1J8 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC17.53■□□□□ 0.4
Tcrg-V4A0A0B4J1J8 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tcrg-V4A0A0B4J1J8 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tcrg-V4A0A0B4J1J8 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tcrg-V4A0A0B4J1J8 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tcrg-V4A0A0B4J1J8 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tcrg-V4A0A0B4J1J8 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Tcrg-V4A0A0B4J1J8 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Tcrg-V4A0A0B4J1J8 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tcrg-V4A0A0B4J1J8 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tcrg-V4A0A0B4J1J8 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Tcrg-V4A0A0B4J1J8 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tcrg-V4A0A0B4J1J8 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tcrg-V4A0A0B4J1J8 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Tcrg-V4A0A0B4J1J8 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Tcrg-V4A0A0B4J1J8 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tcrg-V4A0A0B4J1J8 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tcrg-V4A0A0B4J1J8 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tcrg-V4A0A0B4J1J8 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Tcrg-V4A0A0B4J1J8 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Tcrg-V4A0A0B4J1J8 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC17.49■□□□□ 0.39
Tcrg-V4A0A0B4J1J8 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tcrg-V4A0A0B4J1J8 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Tcrg-V4A0A0B4J1J8 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tcrg-V4A0A0B4J1J8 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Tcrg-V4A0A0B4J1J8 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 8.9 ms