Protein–RNA interactions for Protein: A0A0B4J1H1

Trbv12-2, T cell receptor beta, variable 12-2 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-2A0A0B4J1H1 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trbv12-2A0A0B4J1H1 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trbv12-2A0A0B4J1H1 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trbv12-2A0A0B4J1H1 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trbv12-2A0A0B4J1H1 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC18.63■□□□□ 0.57
Trbv12-2A0A0B4J1H1 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trbv12-2A0A0B4J1H1 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trbv12-2A0A0B4J1H1 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trbv12-2A0A0B4J1H1 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Trbv12-2A0A0B4J1H1 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trbv12-2A0A0B4J1H1 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.61■□□□□ 0.57
Trbv12-2A0A0B4J1H1 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.61■□□□□ 0.57
Trbv12-2A0A0B4J1H1 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trbv12-2A0A0B4J1H1 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trbv12-2A0A0B4J1H1 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trbv12-2A0A0B4J1H1 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
Trbv12-2A0A0B4J1H1 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trbv12-2A0A0B4J1H1 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trbv12-2A0A0B4J1H1 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Trbv12-2A0A0B4J1H1 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trbv12-2A0A0B4J1H1 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trbv12-2A0A0B4J1H1 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trbv12-2A0A0B4J1H1 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trbv12-2A0A0B4J1H1 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trbv12-2A0A0B4J1H1 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Trbv12-2A0A0B4J1H1 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Trbv12-2A0A0B4J1H1 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Trbv12-2A0A0B4J1H1 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trbv12-2A0A0B4J1H1 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trbv12-2A0A0B4J1H1 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trbv12-2A0A0B4J1H1 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trbv12-2A0A0B4J1H1 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trbv12-2A0A0B4J1H1 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trbv12-2A0A0B4J1H1 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trbv12-2A0A0B4J1H1 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trbv12-2A0A0B4J1H1 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
Trbv12-2A0A0B4J1H1 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trbv12-2A0A0B4J1H1 Gm26115-201ENSMUST00000175605 87 ntBASIC18.55■□□□□ 0.56
Trbv12-2A0A0B4J1H1 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC18.55■□□□□ 0.56
Trbv12-2A0A0B4J1H1 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trbv12-2A0A0B4J1H1 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trbv12-2A0A0B4J1H1 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trbv12-2A0A0B4J1H1 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Trbv12-2A0A0B4J1H1 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trbv12-2A0A0B4J1H1 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trbv12-2A0A0B4J1H1 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.53■□□□□ 0.56
Trbv12-2A0A0B4J1H1 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trbv12-2A0A0B4J1H1 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Trbv12-2A0A0B4J1H1 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trbv12-2A0A0B4J1H1 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trbv12-2A0A0B4J1H1 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trbv12-2A0A0B4J1H1 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trbv12-2A0A0B4J1H1 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trbv12-2A0A0B4J1H1 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trbv12-2A0A0B4J1H1 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trbv12-2A0A0B4J1H1 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Trbv12-2A0A0B4J1H1 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trbv12-2A0A0B4J1H1 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Trbv12-2A0A0B4J1H1 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trbv12-2A0A0B4J1H1 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trbv12-2A0A0B4J1H1 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trbv12-2A0A0B4J1H1 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Trbv12-2A0A0B4J1H1 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trbv12-2A0A0B4J1H1 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trbv12-2A0A0B4J1H1 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trbv12-2A0A0B4J1H1 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC18.48■□□□□ 0.55
Trbv12-2A0A0B4J1H1 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trbv12-2A0A0B4J1H1 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trbv12-2A0A0B4J1H1 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trbv12-2A0A0B4J1H1 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trbv12-2A0A0B4J1H1 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trbv12-2A0A0B4J1H1 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trbv12-2A0A0B4J1H1 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.47■□□□□ 0.55
Trbv12-2A0A0B4J1H1 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trbv12-2A0A0B4J1H1 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trbv12-2A0A0B4J1H1 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Trbv12-2A0A0B4J1H1 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trbv12-2A0A0B4J1H1 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trbv12-2A0A0B4J1H1 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trbv12-2A0A0B4J1H1 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trbv12-2A0A0B4J1H1 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Trbv12-2A0A0B4J1H1 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trbv12-2A0A0B4J1H1 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trbv12-2A0A0B4J1H1 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trbv12-2A0A0B4J1H1 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trbv12-2A0A0B4J1H1 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trbv12-2A0A0B4J1H1 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trbv12-2A0A0B4J1H1 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC18.43■□□□□ 0.54
Trbv12-2A0A0B4J1H1 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trbv12-2A0A0B4J1H1 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trbv12-2A0A0B4J1H1 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trbv12-2A0A0B4J1H1 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trbv12-2A0A0B4J1H1 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trbv12-2A0A0B4J1H1 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trbv12-2A0A0B4J1H1 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trbv12-2A0A0B4J1H1 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trbv12-2A0A0B4J1H1 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trbv12-2A0A0B4J1H1 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trbv12-2A0A0B4J1H1 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trbv12-2A0A0B4J1H1 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms