Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV8-1A0A0A6YYK1 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.7
TRAV8-1A0A0A6YYK1 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV8-1A0A0A6YYK1 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC19.39■□□□□ 0.69
TRAV8-1A0A0A6YYK1 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV8-1A0A0A6YYK1 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
TRAV8-1A0A0A6YYK1 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV8-1A0A0A6YYK1 AP004833.2-201ENST00000532228 1454 ntBASIC19.38■□□□□ 0.69
TRAV8-1A0A0A6YYK1 AC135731.1-201ENST00000569415 2548 ntBASIC19.38■□□□□ 0.69
TRAV8-1A0A0A6YYK1 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
TRAV8-1A0A0A6YYK1 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV8-1A0A0A6YYK1 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV8-1A0A0A6YYK1 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV8-1A0A0A6YYK1 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV8-1A0A0A6YYK1 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV8-1A0A0A6YYK1 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV8-1A0A0A6YYK1 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
TRAV8-1A0A0A6YYK1 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC19.36■□□□□ 0.69
TRAV8-1A0A0A6YYK1 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC19.36■□□□□ 0.69
TRAV8-1A0A0A6YYK1 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC19.36■□□□□ 0.69
TRAV8-1A0A0A6YYK1 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV8-1A0A0A6YYK1 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC19.35■□□□□ 0.69
TRAV8-1A0A0A6YYK1 LINC01003-201ENST00000564834 1764 ntBASIC19.35■□□□□ 0.69
TRAV8-1A0A0A6YYK1 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC19.35■□□□□ 0.69
TRAV8-1A0A0A6YYK1 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV8-1A0A0A6YYK1 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV8-1A0A0A6YYK1 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC19.35■□□□□ 0.69
TRAV8-1A0A0A6YYK1 PKM-203ENST00000389093 2279 ntTSL 5 BASIC19.35■□□□□ 0.69
TRAV8-1A0A0A6YYK1 SHF-208ENST00000560734 1731 ntTSL 3 BASIC19.34■□□□□ 0.69
TRAV8-1A0A0A6YYK1 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV8-1A0A0A6YYK1 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV8-1A0A0A6YYK1 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
TRAV8-1A0A0A6YYK1 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV8-1A0A0A6YYK1 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV8-1A0A0A6YYK1 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRAV8-1A0A0A6YYK1 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRAV8-1A0A0A6YYK1 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.68
TRAV8-1A0A0A6YYK1 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TRAV8-1A0A0A6YYK1 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAV8-1A0A0A6YYK1 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAV8-1A0A0A6YYK1 AC127502.1-201ENST00000399971 1502 ntBASIC19.32■□□□□ 0.68
TRAV8-1A0A0A6YYK1 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC19.32■□□□□ 0.68
TRAV8-1A0A0A6YYK1 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRAV8-1A0A0A6YYK1 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC19.32■□□□□ 0.68
TRAV8-1A0A0A6YYK1 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAV8-1A0A0A6YYK1 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAV8-1A0A0A6YYK1 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRAV8-1A0A0A6YYK1 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRAV8-1A0A0A6YYK1 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC19.31■□□□□ 0.68
TRAV8-1A0A0A6YYK1 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC19.31■□□□□ 0.68
TRAV8-1A0A0A6YYK1 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV8-1A0A0A6YYK1 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC19.3■□□□□ 0.68
TRAV8-1A0A0A6YYK1 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV8-1A0A0A6YYK1 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC19.3■□□□□ 0.68
TRAV8-1A0A0A6YYK1 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV8-1A0A0A6YYK1 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV8-1A0A0A6YYK1 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV8-1A0A0A6YYK1 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRAV8-1A0A0A6YYK1 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRAV8-1A0A0A6YYK1 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRAV8-1A0A0A6YYK1 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRAV8-1A0A0A6YYK1 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRAV8-1A0A0A6YYK1 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRAV8-1A0A0A6YYK1 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAV8-1A0A0A6YYK1 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC19.28■□□□□ 0.68
TRAV8-1A0A0A6YYK1 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAV8-1A0A0A6YYK1 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC19.28■□□□□ 0.68
TRAV8-1A0A0A6YYK1 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRAV8-1A0A0A6YYK1 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
TRAV8-1A0A0A6YYK1 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRAV8-1A0A0A6YYK1 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRAV8-1A0A0A6YYK1 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
TRAV8-1A0A0A6YYK1 AC100797.4-201ENST00000631653 1827 ntBASIC19.27■□□□□ 0.68
TRAV8-1A0A0A6YYK1 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC19.27■□□□□ 0.67
TRAV8-1A0A0A6YYK1 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TRAV8-1A0A0A6YYK1 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAV8-1A0A0A6YYK1 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC19.26■□□□□ 0.67
TRAV8-1A0A0A6YYK1 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC19.26■□□□□ 0.67
TRAV8-1A0A0A6YYK1 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC19.26■□□□□ 0.67
TRAV8-1A0A0A6YYK1 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
TRAV8-1A0A0A6YYK1 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC19.26■□□□□ 0.67
TRAV8-1A0A0A6YYK1 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV8-1A0A0A6YYK1 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV8-1A0A0A6YYK1 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV8-1A0A0A6YYK1 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC19.25■□□□□ 0.67
TRAV8-1A0A0A6YYK1 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV8-1A0A0A6YYK1 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV8-1A0A0A6YYK1 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC19.24■□□□□ 0.67
TRAV8-1A0A0A6YYK1 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.24■□□□□ 0.67
TRAV8-1A0A0A6YYK1 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV8-1A0A0A6YYK1 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV8-1A0A0A6YYK1 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC19.23■□□□□ 0.67
TRAV8-1A0A0A6YYK1 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
TRAV8-1A0A0A6YYK1 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV8-1A0A0A6YYK1 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC19.23■□□□□ 0.67
TRAV8-1A0A0A6YYK1 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC19.23■□□□□ 0.67
TRAV8-1A0A0A6YYK1 AL449106.1-201ENST00000608517 1980 ntBASIC19.23■□□□□ 0.67
TRAV8-1A0A0A6YYK1 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV8-1A0A0A6YYK1 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV8-1A0A0A6YYK1 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms