Protein–RNA interactions for Protein: A0A0A6YYG2

TRBV6-6, T-cell receptor beta variable 6-6 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-6A0A0A6YYG2 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRBV6-6A0A0A6YYG2 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TRBV6-6A0A0A6YYG2 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC21.36■■□□□ 1.01
TRBV6-6A0A0A6YYG2 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.36■■□□□ 1.01
TRBV6-6A0A0A6YYG2 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRBV6-6A0A0A6YYG2 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
TRBV6-6A0A0A6YYG2 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRBV6-6A0A0A6YYG2 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRBV6-6A0A0A6YYG2 LINC01003-201ENST00000564834 1764 ntBASIC21.34■■□□□ 1.01
TRBV6-6A0A0A6YYG2 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRBV6-6A0A0A6YYG2 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.33■■□□□ 1.01
TRBV6-6A0A0A6YYG2 AC100797.4-201ENST00000631653 1827 ntBASIC21.33■■□□□ 1.01
TRBV6-6A0A0A6YYG2 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.33■■□□□ 1
TRBV6-6A0A0A6YYG2 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
TRBV6-6A0A0A6YYG2 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRBV6-6A0A0A6YYG2 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC21.32■■□□□ 1
TRBV6-6A0A0A6YYG2 RPS2-209ENST00000529806 993 ntTSL 3 BASIC21.32■■□□□ 1
TRBV6-6A0A0A6YYG2 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC21.32■■□□□ 1
TRBV6-6A0A0A6YYG2 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRBV6-6A0A0A6YYG2 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.32■■□□□ 1
TRBV6-6A0A0A6YYG2 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC21.31■■□□□ 1
TRBV6-6A0A0A6YYG2 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC21.31■■□□□ 1
TRBV6-6A0A0A6YYG2 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.31■■□□□ 1
TRBV6-6A0A0A6YYG2 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRBV6-6A0A0A6YYG2 AP002414.2-202ENST00000590929 1450 ntBASIC21.31■■□□□ 1
TRBV6-6A0A0A6YYG2 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC21.31■■□□□ 1
TRBV6-6A0A0A6YYG2 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRBV6-6A0A0A6YYG2 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC21.3■■□□□ 1
TRBV6-6A0A0A6YYG2 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRBV6-6A0A0A6YYG2 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC21.3■■□□□ 1
TRBV6-6A0A0A6YYG2 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRBV6-6A0A0A6YYG2 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRBV6-6A0A0A6YYG2 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRBV6-6A0A0A6YYG2 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC21.29■■□□□ 1
TRBV6-6A0A0A6YYG2 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
TRBV6-6A0A0A6YYG2 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC21.29■■□□□ 1
TRBV6-6A0A0A6YYG2 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRBV6-6A0A0A6YYG2 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRBV6-6A0A0A6YYG2 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
TRBV6-6A0A0A6YYG2 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.27■■□□□ 1
TRBV6-6A0A0A6YYG2 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
TRBV6-6A0A0A6YYG2 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRBV6-6A0A0A6YYG2 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
TRBV6-6A0A0A6YYG2 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
TRBV6-6A0A0A6YYG2 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
TRBV6-6A0A0A6YYG2 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
TRBV6-6A0A0A6YYG2 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRBV6-6A0A0A6YYG2 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC21.26■□□□□ 0.99
TRBV6-6A0A0A6YYG2 AC005559.1-201ENST00000589661 871 ntBASIC21.26■□□□□ 0.99
TRBV6-6A0A0A6YYG2 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRBV6-6A0A0A6YYG2 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.26■□□□□ 0.99
TRBV6-6A0A0A6YYG2 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRBV6-6A0A0A6YYG2 HNRNPLP2-201ENST00000568980 1570 ntBASIC21.25■□□□□ 0.99
TRBV6-6A0A0A6YYG2 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.25■□□□□ 0.99
TRBV6-6A0A0A6YYG2 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRBV6-6A0A0A6YYG2 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC21.24■□□□□ 0.99
TRBV6-6A0A0A6YYG2 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.24■□□□□ 0.99
TRBV6-6A0A0A6YYG2 SUZ12P1-203ENST00000578195 985 ntBASIC21.24■□□□□ 0.99
TRBV6-6A0A0A6YYG2 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRBV6-6A0A0A6YYG2 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
TRBV6-6A0A0A6YYG2 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.23■□□□□ 0.99
TRBV6-6A0A0A6YYG2 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC21.23■□□□□ 0.99
TRBV6-6A0A0A6YYG2 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRBV6-6A0A0A6YYG2 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRBV6-6A0A0A6YYG2 AC135983.2-203ENST00000454486 1613 ntBASIC21.22■□□□□ 0.99
TRBV6-6A0A0A6YYG2 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
TRBV6-6A0A0A6YYG2 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.22■□□□□ 0.99
TRBV6-6A0A0A6YYG2 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRBV6-6A0A0A6YYG2 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.22■□□□□ 0.99
TRBV6-6A0A0A6YYG2 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
TRBV6-6A0A0A6YYG2 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRBV6-6A0A0A6YYG2 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC21.21■□□□□ 0.99
TRBV6-6A0A0A6YYG2 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC21.21■□□□□ 0.99
TRBV6-6A0A0A6YYG2 AC108673.1-201ENST00000510422 1159 ntBASIC21.21■□□□□ 0.99
TRBV6-6A0A0A6YYG2 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.21■□□□□ 0.99
TRBV6-6A0A0A6YYG2 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRBV6-6A0A0A6YYG2 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TRBV6-6A0A0A6YYG2 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRBV6-6A0A0A6YYG2 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRBV6-6A0A0A6YYG2 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRBV6-6A0A0A6YYG2 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.19■□□□□ 0.98
TRBV6-6A0A0A6YYG2 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.19■□□□□ 0.98
TRBV6-6A0A0A6YYG2 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
TRBV6-6A0A0A6YYG2 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TRBV6-6A0A0A6YYG2 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRBV6-6A0A0A6YYG2 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TRBV6-6A0A0A6YYG2 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TRBV6-6A0A0A6YYG2 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRBV6-6A0A0A6YYG2 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRBV6-6A0A0A6YYG2 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
TRBV6-6A0A0A6YYG2 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRBV6-6A0A0A6YYG2 EI24-212ENST00000615917 1407 ntTSL 2 BASIC21.17■□□□□ 0.98
TRBV6-6A0A0A6YYG2 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRBV6-6A0A0A6YYG2 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRBV6-6A0A0A6YYG2 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRBV6-6A0A0A6YYG2 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRBV6-6A0A0A6YYG2 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRBV6-6A0A0A6YYG2 AC018358.1-201ENST00000631079 1402 ntBASIC21.16■□□□□ 0.98
TRBV6-6A0A0A6YYG2 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRBV6-6A0A0A6YYG2 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms