Protein–RNA interactions for Protein: A0A0A6YXC3

Ighv1-52, Immunoglobulin heavy variable 1-52 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-52A0A0A6YXC3 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ighv1-52A0A0A6YXC3 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC17.97■□□□□ 0.47
Ighv1-52A0A0A6YXC3 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ighv1-52A0A0A6YXC3 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ighv1-52A0A0A6YXC3 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ighv1-52A0A0A6YXC3 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Ighv1-52A0A0A6YXC3 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ighv1-52A0A0A6YXC3 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ighv1-52A0A0A6YXC3 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Ighv1-52A0A0A6YXC3 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ighv1-52A0A0A6YXC3 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC17.95■□□□□ 0.46
Ighv1-52A0A0A6YXC3 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC17.95■□□□□ 0.46
Ighv1-52A0A0A6YXC3 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ighv1-52A0A0A6YXC3 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv1-52A0A0A6YXC3 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv1-52A0A0A6YXC3 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv1-52A0A0A6YXC3 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ighv1-52A0A0A6YXC3 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ighv1-52A0A0A6YXC3 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ighv1-52A0A0A6YXC3 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ighv1-52A0A0A6YXC3 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ighv1-52A0A0A6YXC3 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Ighv1-52A0A0A6YXC3 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ighv1-52A0A0A6YXC3 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ighv1-52A0A0A6YXC3 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ighv1-52A0A0A6YXC3 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ighv1-52A0A0A6YXC3 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ighv1-52A0A0A6YXC3 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ighv1-52A0A0A6YXC3 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ighv1-52A0A0A6YXC3 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ighv1-52A0A0A6YXC3 Particl-201ENSMUST00000205370 1560 ntBASIC17.87■□□□□ 0.45
Ighv1-52A0A0A6YXC3 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Ighv1-52A0A0A6YXC3 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ighv1-52A0A0A6YXC3 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ighv1-52A0A0A6YXC3 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ighv1-52A0A0A6YXC3 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ighv1-52A0A0A6YXC3 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ighv1-52A0A0A6YXC3 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC17.84■□□□□ 0.45
Ighv1-52A0A0A6YXC3 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Ighv1-52A0A0A6YXC3 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Ighv1-52A0A0A6YXC3 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ighv1-52A0A0A6YXC3 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ighv1-52A0A0A6YXC3 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC17.83■□□□□ 0.44
Ighv1-52A0A0A6YXC3 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ighv1-52A0A0A6YXC3 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC17.82■□□□□ 0.44
Ighv1-52A0A0A6YXC3 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Ighv1-52A0A0A6YXC3 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ighv1-52A0A0A6YXC3 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ighv1-52A0A0A6YXC3 Gm7432-201ENSMUST00000210343 879 ntBASIC17.81■□□□□ 0.44
Ighv1-52A0A0A6YXC3 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ighv1-52A0A0A6YXC3 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ighv1-52A0A0A6YXC3 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC17.8■□□□□ 0.44
Ighv1-52A0A0A6YXC3 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC17.8■□□□□ 0.44
Ighv1-52A0A0A6YXC3 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ighv1-52A0A0A6YXC3 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC17.8■□□□□ 0.44
Ighv1-52A0A0A6YXC3 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ighv1-52A0A0A6YXC3 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ighv1-52A0A0A6YXC3 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Ighv1-52A0A0A6YXC3 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC17.79■□□□□ 0.44
Ighv1-52A0A0A6YXC3 AC131739.1-201ENSMUST00000221692 1245 ntBASIC17.79■□□□□ 0.44
Ighv1-52A0A0A6YXC3 Gm37847-201ENSMUST00000192163 1497 ntBASIC17.79■□□□□ 0.44
Ighv1-52A0A0A6YXC3 Gm31748-201ENSMUST00000194938 1497 ntBASIC17.79■□□□□ 0.44
Ighv1-52A0A0A6YXC3 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ighv1-52A0A0A6YXC3 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ighv1-52A0A0A6YXC3 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ighv1-52A0A0A6YXC3 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ighv1-52A0A0A6YXC3 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ighv1-52A0A0A6YXC3 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ighv1-52A0A0A6YXC3 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ighv1-52A0A0A6YXC3 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ighv1-52A0A0A6YXC3 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Ighv1-52A0A0A6YXC3 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ighv1-52A0A0A6YXC3 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ighv1-52A0A0A6YXC3 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Ighv1-52A0A0A6YXC3 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Ighv1-52A0A0A6YXC3 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ighv1-52A0A0A6YXC3 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ighv1-52A0A0A6YXC3 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Ighv1-52A0A0A6YXC3 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ighv1-52A0A0A6YXC3 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ighv1-52A0A0A6YXC3 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ighv1-52A0A0A6YXC3 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ighv1-52A0A0A6YXC3 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ighv1-52A0A0A6YXC3 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ighv1-52A0A0A6YXC3 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC17.74■□□□□ 0.43
Ighv1-52A0A0A6YXC3 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ighv1-52A0A0A6YXC3 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ighv1-52A0A0A6YXC3 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ighv1-52A0A0A6YXC3 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ighv1-52A0A0A6YXC3 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Ighv1-52A0A0A6YXC3 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ighv1-52A0A0A6YXC3 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Ighv1-52A0A0A6YXC3 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ighv1-52A0A0A6YXC3 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ighv1-52A0A0A6YXC3 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ighv1-52A0A0A6YXC3 Gm11599-201ENSMUST00000118720 878 ntBASIC17.71■□□□□ 0.43
Ighv1-52A0A0A6YXC3 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ighv1-52A0A0A6YXC3 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Ighv1-52A0A0A6YXC3 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ighv1-52A0A0A6YXC3 Gm37136-201ENSMUST00000194368 194 ntBASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms