Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC18.01■□□□□ 0.47
Trav21-dv12A0A075B6C4 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trav21-dv12A0A075B6C4 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav21-dv12A0A075B6C4 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
Trav21-dv12A0A075B6C4 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav21-dv12A0A075B6C4 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav21-dv12A0A075B6C4 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav21-dv12A0A075B6C4 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trav21-dv12A0A075B6C4 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trav21-dv12A0A075B6C4 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trav21-dv12A0A075B6C4 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav21-dv12A0A075B6C4 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC17.98■□□□□ 0.47
Trav21-dv12A0A075B6C4 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav21-dv12A0A075B6C4 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav21-dv12A0A075B6C4 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav21-dv12A0A075B6C4 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trav21-dv12A0A075B6C4 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trav21-dv12A0A075B6C4 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav21-dv12A0A075B6C4 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav21-dv12A0A075B6C4 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Trav21-dv12A0A075B6C4 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav21-dv12A0A075B6C4 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav21-dv12A0A075B6C4 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav21-dv12A0A075B6C4 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav21-dv12A0A075B6C4 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav21-dv12A0A075B6C4 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav21-dv12A0A075B6C4 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav21-dv12A0A075B6C4 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav21-dv12A0A075B6C4 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC17.93■□□□□ 0.46
Trav21-dv12A0A075B6C4 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav21-dv12A0A075B6C4 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Trav21-dv12A0A075B6C4 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trav21-dv12A0A075B6C4 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav21-dv12A0A075B6C4 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC17.93■□□□□ 0.46
Trav21-dv12A0A075B6C4 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav21-dv12A0A075B6C4 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Trav21-dv12A0A075B6C4 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trav21-dv12A0A075B6C4 Gm30023-201ENSMUST00000197970 889 ntBASIC17.91■□□□□ 0.46
Trav21-dv12A0A075B6C4 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC17.91■□□□□ 0.46
Trav21-dv12A0A075B6C4 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav21-dv12A0A075B6C4 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Trav21-dv12A0A075B6C4 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav21-dv12A0A075B6C4 AC122428.3-201ENSMUST00000215551 2290 ntBASIC17.91■□□□□ 0.46
Trav21-dv12A0A075B6C4 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav21-dv12A0A075B6C4 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav21-dv12A0A075B6C4 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC17.9■□□□□ 0.46
Trav21-dv12A0A075B6C4 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
Trav21-dv12A0A075B6C4 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav21-dv12A0A075B6C4 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav21-dv12A0A075B6C4 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav21-dv12A0A075B6C4 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav21-dv12A0A075B6C4 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC17.88■□□□□ 0.45
Trav21-dv12A0A075B6C4 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav21-dv12A0A075B6C4 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav21-dv12A0A075B6C4 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trav21-dv12A0A075B6C4 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav21-dv12A0A075B6C4 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Trav21-dv12A0A075B6C4 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav21-dv12A0A075B6C4 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Trav21-dv12A0A075B6C4 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC17.86■□□□□ 0.45
Trav21-dv12A0A075B6C4 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
Trav21-dv12A0A075B6C4 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trav21-dv12A0A075B6C4 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC17.86■□□□□ 0.45
Trav21-dv12A0A075B6C4 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trav21-dv12A0A075B6C4 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav21-dv12A0A075B6C4 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
Trav21-dv12A0A075B6C4 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trav21-dv12A0A075B6C4 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Trav21-dv12A0A075B6C4 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav21-dv12A0A075B6C4 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav21-dv12A0A075B6C4 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav21-dv12A0A075B6C4 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav21-dv12A0A075B6C4 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav21-dv12A0A075B6C4 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav21-dv12A0A075B6C4 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Trav21-dv12A0A075B6C4 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Trav21-dv12A0A075B6C4 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav21-dv12A0A075B6C4 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trav21-dv12A0A075B6C4 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav21-dv12A0A075B6C4 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav21-dv12A0A075B6C4 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC17.82■□□□□ 0.44
Trav21-dv12A0A075B6C4 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav21-dv12A0A075B6C4 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Trav21-dv12A0A075B6C4 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trav21-dv12A0A075B6C4 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trav21-dv12A0A075B6C4 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav21-dv12A0A075B6C4 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav21-dv12A0A075B6C4 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Trav21-dv12A0A075B6C4 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC17.81■□□□□ 0.44
Trav21-dv12A0A075B6C4 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trav21-dv12A0A075B6C4 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav21-dv12A0A075B6C4 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Trav21-dv12A0A075B6C4 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav21-dv12A0A075B6C4 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav21-dv12A0A075B6C4 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav21-dv12A0A075B6C4 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav21-dv12A0A075B6C4 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav21-dv12A0A075B6C4 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav21-dv12A0A075B6C4 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC17.79■□□□□ 0.44
Trav21-dv12A0A075B6C4 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms