Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC18.12■□□□□ 0.49
Trav6-4A0A075B6B4 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav6-4A0A075B6B4 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC18.11■□□□□ 0.49
Trav6-4A0A075B6B4 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC18.1■□□□□ 0.49
Trav6-4A0A075B6B4 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trav6-4A0A075B6B4 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav6-4A0A075B6B4 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav6-4A0A075B6B4 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC18.09■□□□□ 0.49
Trav6-4A0A075B6B4 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav6-4A0A075B6B4 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trav6-4A0A075B6B4 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trav6-4A0A075B6B4 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC18.08■□□□□ 0.49
Trav6-4A0A075B6B4 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav6-4A0A075B6B4 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trav6-4A0A075B6B4 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Trav6-4A0A075B6B4 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC18.07■□□□□ 0.48
Trav6-4A0A075B6B4 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC18.07■□□□□ 0.48
Trav6-4A0A075B6B4 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav6-4A0A075B6B4 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav6-4A0A075B6B4 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav6-4A0A075B6B4 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trav6-4A0A075B6B4 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trav6-4A0A075B6B4 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trav6-4A0A075B6B4 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trav6-4A0A075B6B4 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Trav6-4A0A075B6B4 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav6-4A0A075B6B4 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trav6-4A0A075B6B4 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Trav6-4A0A075B6B4 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav6-4A0A075B6B4 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav6-4A0A075B6B4 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trav6-4A0A075B6B4 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav6-4A0A075B6B4 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trav6-4A0A075B6B4 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC18.04■□□□□ 0.48
Trav6-4A0A075B6B4 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trav6-4A0A075B6B4 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC18.03■□□□□ 0.48
Trav6-4A0A075B6B4 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav6-4A0A075B6B4 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav6-4A0A075B6B4 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC18.02■□□□□ 0.48
Trav6-4A0A075B6B4 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav6-4A0A075B6B4 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC18.01■□□□□ 0.47
Trav6-4A0A075B6B4 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Trav6-4A0A075B6B4 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trav6-4A0A075B6B4 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Trav6-4A0A075B6B4 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav6-4A0A075B6B4 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Trav6-4A0A075B6B4 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Trav6-4A0A075B6B4 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav6-4A0A075B6B4 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav6-4A0A075B6B4 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav6-4A0A075B6B4 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trav6-4A0A075B6B4 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav6-4A0A075B6B4 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav6-4A0A075B6B4 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trav6-4A0A075B6B4 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trav6-4A0A075B6B4 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC17.96■□□□□ 0.46
Trav6-4A0A075B6B4 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC17.95■□□□□ 0.46
Trav6-4A0A075B6B4 Particl-201ENSMUST00000205370 1560 ntBASIC17.95■□□□□ 0.46
Trav6-4A0A075B6B4 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav6-4A0A075B6B4 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav6-4A0A075B6B4 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav6-4A0A075B6B4 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC17.94■□□□□ 0.46
Trav6-4A0A075B6B4 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav6-4A0A075B6B4 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav6-4A0A075B6B4 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trav6-4A0A075B6B4 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav6-4A0A075B6B4 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav6-4A0A075B6B4 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trav6-4A0A075B6B4 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trav6-4A0A075B6B4 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav6-4A0A075B6B4 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav6-4A0A075B6B4 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trav6-4A0A075B6B4 Gm37847-201ENSMUST00000192163 1497 ntBASIC17.92■□□□□ 0.46
Trav6-4A0A075B6B4 Gm31748-201ENSMUST00000194938 1497 ntBASIC17.92■□□□□ 0.46
Trav6-4A0A075B6B4 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav6-4A0A075B6B4 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav6-4A0A075B6B4 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trav6-4A0A075B6B4 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trav6-4A0A075B6B4 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav6-4A0A075B6B4 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Trav6-4A0A075B6B4 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav6-4A0A075B6B4 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Trav6-4A0A075B6B4 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav6-4A0A075B6B4 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav6-4A0A075B6B4 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
Trav6-4A0A075B6B4 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Trav6-4A0A075B6B4 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav6-4A0A075B6B4 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Trav6-4A0A075B6B4 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Trav6-4A0A075B6B4 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trav6-4A0A075B6B4 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC17.87■□□□□ 0.45
Trav6-4A0A075B6B4 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trav6-4A0A075B6B4 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC17.87■□□□□ 0.45
Trav6-4A0A075B6B4 Gm7432-201ENSMUST00000210343 879 ntBASIC17.87■□□□□ 0.45
Trav6-4A0A075B6B4 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav6-4A0A075B6B4 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav6-4A0A075B6B4 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav6-4A0A075B6B4 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Trav6-4A0A075B6B4 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trav6-4A0A075B6B4 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 98.9 ms