Protein–RNA interactions for Protein: A0A075B640

Trav7-6, T cell receptor alpha variable 7-6 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-6A0A075B640 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
Trav7-6A0A075B640 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC16.31■□□□□ 0.2
Trav7-6A0A075B640 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav7-6A0A075B640 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav7-6A0A075B640 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav7-6A0A075B640 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav7-6A0A075B640 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Trav7-6A0A075B640 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav7-6A0A075B640 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav7-6A0A075B640 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav7-6A0A075B640 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav7-6A0A075B640 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC16.29■□□□□ 0.2
Trav7-6A0A075B640 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav7-6A0A075B640 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav7-6A0A075B640 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav7-6A0A075B640 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav7-6A0A075B640 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Trav7-6A0A075B640 Gm43863-201ENSMUST00000203822 1192 ntBASIC16.28■□□□□ 0.2
Trav7-6A0A075B640 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC16.28■□□□□ 0.2
Trav7-6A0A075B640 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav7-6A0A075B640 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav7-6A0A075B640 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav7-6A0A075B640 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Trav7-6A0A075B640 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Trav7-6A0A075B640 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav7-6A0A075B640 Zfp131-205ENSMUST00000223812 663 ntBASIC16.26■□□□□ 0.19
Trav7-6A0A075B640 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav7-6A0A075B640 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav7-6A0A075B640 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav7-6A0A075B640 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Trav7-6A0A075B640 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
Trav7-6A0A075B640 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav7-6A0A075B640 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC16.24■□□□□ 0.19
Trav7-6A0A075B640 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trav7-6A0A075B640 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Trav7-6A0A075B640 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav7-6A0A075B640 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav7-6A0A075B640 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Trav7-6A0A075B640 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trav7-6A0A075B640 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav7-6A0A075B640 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Trav7-6A0A075B640 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Trav7-6A0A075B640 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Trav7-6A0A075B640 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trav7-6A0A075B640 AC157572.2-201ENSMUST00000226970 908 ntBASIC16.23■□□□□ 0.19
Trav7-6A0A075B640 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav7-6A0A075B640 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav7-6A0A075B640 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC16.22■□□□□ 0.19
Trav7-6A0A075B640 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Trav7-6A0A075B640 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav7-6A0A075B640 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Trav7-6A0A075B640 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trav7-6A0A075B640 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav7-6A0A075B640 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Trav7-6A0A075B640 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Trav7-6A0A075B640 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav7-6A0A075B640 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav7-6A0A075B640 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC16.2■□□□□ 0.18
Trav7-6A0A075B640 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Trav7-6A0A075B640 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav7-6A0A075B640 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Trav7-6A0A075B640 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav7-6A0A075B640 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav7-6A0A075B640 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC16.19■□□□□ 0.18
Trav7-6A0A075B640 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav7-6A0A075B640 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav7-6A0A075B640 Tdp2-203ENSMUST00000223804 1136 ntBASIC16.18■□□□□ 0.18
Trav7-6A0A075B640 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav7-6A0A075B640 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav7-6A0A075B640 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC16.18■□□□□ 0.18
Trav7-6A0A075B640 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav7-6A0A075B640 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav7-6A0A075B640 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Trav7-6A0A075B640 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC16.17■□□□□ 0.18
Trav7-6A0A075B640 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC16.17■□□□□ 0.18
Trav7-6A0A075B640 Gm17641-201ENSMUST00000166328 2350 ntBASIC16.17■□□□□ 0.18
Trav7-6A0A075B640 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav7-6A0A075B640 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trav7-6A0A075B640 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav7-6A0A075B640 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav7-6A0A075B640 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC16.16■□□□□ 0.18
Trav7-6A0A075B640 Gm9397-201ENSMUST00000200125 605 ntBASIC16.16■□□□□ 0.18
Trav7-6A0A075B640 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav7-6A0A075B640 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav7-6A0A075B640 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Trav7-6A0A075B640 Gm24970-201ENSMUST00000175582 82 ntBASIC16.15■□□□□ 0.18
Trav7-6A0A075B640 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC16.15■□□□□ 0.18
Trav7-6A0A075B640 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC16.15■□□□□ 0.18
Trav7-6A0A075B640 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav7-6A0A075B640 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav7-6A0A075B640 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav7-6A0A075B640 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav7-6A0A075B640 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Trav7-6A0A075B640 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.18
Trav7-6A0A075B640 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC16.14■□□□□ 0.18
Trav7-6A0A075B640 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav7-6A0A075B640 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Trav7-6A0A075B640 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Trav7-6A0A075B640 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trav7-6A0A075B640 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms