Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC16.01■□□□□ 0.15
Trav9n-4A0A075B631 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav9n-4A0A075B631 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav9n-4A0A075B631 Gm9397-201ENSMUST00000200125 605 ntBASIC16.01■□□□□ 0.15
Trav9n-4A0A075B631 Tdp2-203ENSMUST00000223804 1136 ntBASIC16.01■□□□□ 0.15
Trav9n-4A0A075B631 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav9n-4A0A075B631 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav9n-4A0A075B631 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC16■□□□□ 0.15
Trav9n-4A0A075B631 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav9n-4A0A075B631 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Trav9n-4A0A075B631 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav9n-4A0A075B631 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav9n-4A0A075B631 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav9n-4A0A075B631 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC15.99■□□□□ 0.15
Trav9n-4A0A075B631 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav9n-4A0A075B631 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav9n-4A0A075B631 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav9n-4A0A075B631 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Trav9n-4A0A075B631 Gm24970-201ENSMUST00000175582 82 ntBASIC15.98■□□□□ 0.15
Trav9n-4A0A075B631 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav9n-4A0A075B631 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Trav9n-4A0A075B631 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
Trav9n-4A0A075B631 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav9n-4A0A075B631 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav9n-4A0A075B631 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav9n-4A0A075B631 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Trav9n-4A0A075B631 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav9n-4A0A075B631 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav9n-4A0A075B631 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC15.97■□□□□ 0.15
Trav9n-4A0A075B631 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav9n-4A0A075B631 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC15.97■□□□□ 0.15
Trav9n-4A0A075B631 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav9n-4A0A075B631 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav9n-4A0A075B631 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav9n-4A0A075B631 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.14
Trav9n-4A0A075B631 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav9n-4A0A075B631 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav9n-4A0A075B631 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC15.94■□□□□ 0.14
Trav9n-4A0A075B631 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav9n-4A0A075B631 Gm45855-201ENSMUST00000212546 880 ntBASIC15.94■□□□□ 0.14
Trav9n-4A0A075B631 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav9n-4A0A075B631 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav9n-4A0A075B631 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC15.93■□□□□ 0.14
Trav9n-4A0A075B631 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav9n-4A0A075B631 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav9n-4A0A075B631 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav9n-4A0A075B631 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav9n-4A0A075B631 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC15.92■□□□□ 0.14
Trav9n-4A0A075B631 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav9n-4A0A075B631 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav9n-4A0A075B631 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav9n-4A0A075B631 AC122428.3-201ENSMUST00000215551 2290 ntBASIC15.91■□□□□ 0.14
Trav9n-4A0A075B631 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav9n-4A0A075B631 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav9n-4A0A075B631 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav9n-4A0A075B631 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav9n-4A0A075B631 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC15.9■□□□□ 0.14
Trav9n-4A0A075B631 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav9n-4A0A075B631 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
Trav9n-4A0A075B631 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav9n-4A0A075B631 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav9n-4A0A075B631 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC15.88■□□□□ 0.13
Trav9n-4A0A075B631 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav9n-4A0A075B631 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav9n-4A0A075B631 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav9n-4A0A075B631 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav9n-4A0A075B631 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav9n-4A0A075B631 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC15.87■□□□□ 0.13
Trav9n-4A0A075B631 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav9n-4A0A075B631 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav9n-4A0A075B631 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Trav9n-4A0A075B631 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav9n-4A0A075B631 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav9n-4A0A075B631 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav9n-4A0A075B631 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav9n-4A0A075B631 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav9n-4A0A075B631 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC15.85■□□□□ 0.13
Trav9n-4A0A075B631 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav9n-4A0A075B631 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav9n-4A0A075B631 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav9n-4A0A075B631 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav9n-4A0A075B631 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav9n-4A0A075B631 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Trav9n-4A0A075B631 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav9n-4A0A075B631 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav9n-4A0A075B631 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav9n-4A0A075B631 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav9n-4A0A075B631 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav9n-4A0A075B631 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC15.82■□□□□ 0.12
Trav9n-4A0A075B631 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav9n-4A0A075B631 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav9n-4A0A075B631 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Trav9n-4A0A075B631 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
Trav9n-4A0A075B631 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Trav9n-4A0A075B631 Gm30023-201ENSMUST00000197970 889 ntBASIC15.81■□□□□ 0.12
Trav9n-4A0A075B631 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav9n-4A0A075B631 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav9n-4A0A075B631 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav9n-4A0A075B631 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav9n-4A0A075B631 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms