Protein–RNA interactions for Protein: A0A075B622

Trav10n, T cell receptor alpha variable 10N (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10nA0A075B622 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
Trav10nA0A075B622 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trav10nA0A075B622 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Trav10nA0A075B622 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.89■□□□□ 0.93
Trav10nA0A075B622 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trav10nA0A075B622 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trav10nA0A075B622 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.88■□□□□ 0.93
Trav10nA0A075B622 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trav10nA0A075B622 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Trav10nA0A075B622 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trav10nA0A075B622 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.87■□□□□ 0.93
Trav10nA0A075B622 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trav10nA0A075B622 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Trav10nA0A075B622 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.86■□□□□ 0.93
Trav10nA0A075B622 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trav10nA0A075B622 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.85■□□□□ 0.93
Trav10nA0A075B622 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trav10nA0A075B622 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.85■□□□□ 0.93
Trav10nA0A075B622 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
Trav10nA0A075B622 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Trav10nA0A075B622 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Trav10nA0A075B622 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Trav10nA0A075B622 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.84■□□□□ 0.93
Trav10nA0A075B622 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trav10nA0A075B622 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trav10nA0A075B622 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trav10nA0A075B622 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Trav10nA0A075B622 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trav10nA0A075B622 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trav10nA0A075B622 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.82■□□□□ 0.92
Trav10nA0A075B622 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Trav10nA0A075B622 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Trav10nA0A075B622 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
Trav10nA0A075B622 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Trav10nA0A075B622 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.81■□□□□ 0.92
Trav10nA0A075B622 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trav10nA0A075B622 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.8■□□□□ 0.92
Trav10nA0A075B622 Gm6821-201ENSMUST00000107540 542 ntBASIC20.79■□□□□ 0.92
Trav10nA0A075B622 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.78■□□□□ 0.92
Trav10nA0A075B622 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Trav10nA0A075B622 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Trav10nA0A075B622 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.77■□□□□ 0.92
Trav10nA0A075B622 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trav10nA0A075B622 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.76■□□□□ 0.91
Trav10nA0A075B622 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trav10nA0A075B622 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trav10nA0A075B622 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trav10nA0A075B622 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Trav10nA0A075B622 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.75■□□□□ 0.91
Trav10nA0A075B622 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Trav10nA0A075B622 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trav10nA0A075B622 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.73■□□□□ 0.91
Trav10nA0A075B622 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Trav10nA0A075B622 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trav10nA0A075B622 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trav10nA0A075B622 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trav10nA0A075B622 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.72■□□□□ 0.91
Trav10nA0A075B622 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.72■□□□□ 0.91
Trav10nA0A075B622 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Trav10nA0A075B622 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Trav10nA0A075B622 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trav10nA0A075B622 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.7■□□□□ 0.9
Trav10nA0A075B622 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trav10nA0A075B622 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trav10nA0A075B622 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trav10nA0A075B622 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.69■□□□□ 0.9
Trav10nA0A075B622 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trav10nA0A075B622 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Trav10nA0A075B622 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Trav10nA0A075B622 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trav10nA0A075B622 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trav10nA0A075B622 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trav10nA0A075B622 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trav10nA0A075B622 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.66■□□□□ 0.9
Trav10nA0A075B622 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trav10nA0A075B622 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.65■□□□□ 0.9
Trav10nA0A075B622 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.64■□□□□ 0.89
Trav10nA0A075B622 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.64■□□□□ 0.89
Trav10nA0A075B622 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trav10nA0A075B622 Gm8503-201ENSMUST00000118131 455 ntBASIC20.63■□□□□ 0.89
Trav10nA0A075B622 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.63■□□□□ 0.89
Trav10nA0A075B622 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.63■□□□□ 0.89
Trav10nA0A075B622 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trav10nA0A075B622 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trav10nA0A075B622 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Trav10nA0A075B622 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trav10nA0A075B622 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trav10nA0A075B622 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trav10nA0A075B622 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trav10nA0A075B622 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Trav10nA0A075B622 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trav10nA0A075B622 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.59■□□□□ 0.89
Trav10nA0A075B622 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trav10nA0A075B622 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trav10nA0A075B622 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
Trav10nA0A075B622 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Trav10nA0A075B622 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trav10nA0A075B622 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trav10nA0A075B622 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trav10nA0A075B622 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms