Protein–RNA interactions for Protein: A0A075B5W5

Ighv1-54, Immunoglobulin heavy variable V1-54 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-54A0A075B5W5 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.18■□□□□ 0.98
Ighv1-54A0A075B5W5 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Ighv1-54A0A075B5W5 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ighv1-54A0A075B5W5 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ighv1-54A0A075B5W5 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ighv1-54A0A075B5W5 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ighv1-54A0A075B5W5 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ighv1-54A0A075B5W5 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ighv1-54A0A075B5W5 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Ighv1-54A0A075B5W5 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ighv1-54A0A075B5W5 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ighv1-54A0A075B5W5 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.14■□□□□ 0.98
Ighv1-54A0A075B5W5 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ighv1-54A0A075B5W5 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ighv1-54A0A075B5W5 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ighv1-54A0A075B5W5 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ighv1-54A0A075B5W5 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ighv1-54A0A075B5W5 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ighv1-54A0A075B5W5 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ighv1-54A0A075B5W5 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.13■□□□□ 0.97
Ighv1-54A0A075B5W5 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ighv1-54A0A075B5W5 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ighv1-54A0A075B5W5 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ighv1-54A0A075B5W5 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Ighv1-54A0A075B5W5 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.1■□□□□ 0.97
Ighv1-54A0A075B5W5 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ighv1-54A0A075B5W5 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Ighv1-54A0A075B5W5 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ighv1-54A0A075B5W5 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ighv1-54A0A075B5W5 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ighv1-54A0A075B5W5 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.09■□□□□ 0.97
Ighv1-54A0A075B5W5 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ighv1-54A0A075B5W5 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ighv1-54A0A075B5W5 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ighv1-54A0A075B5W5 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ighv1-54A0A075B5W5 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ighv1-54A0A075B5W5 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ighv1-54A0A075B5W5 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ighv1-54A0A075B5W5 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ighv1-54A0A075B5W5 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ighv1-54A0A075B5W5 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.04■□□□□ 0.96
Ighv1-54A0A075B5W5 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.04■□□□□ 0.96
Ighv1-54A0A075B5W5 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ighv1-54A0A075B5W5 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ighv1-54A0A075B5W5 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ighv1-54A0A075B5W5 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Ighv1-54A0A075B5W5 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ighv1-54A0A075B5W5 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Ighv1-54A0A075B5W5 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ighv1-54A0A075B5W5 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.01■□□□□ 0.95
Ighv1-54A0A075B5W5 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Ighv1-54A0A075B5W5 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ighv1-54A0A075B5W5 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ighv1-54A0A075B5W5 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Ighv1-54A0A075B5W5 Particl-201ENSMUST00000205370 1560 ntBASIC21■□□□□ 0.95
Ighv1-54A0A075B5W5 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Ighv1-54A0A075B5W5 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Ighv1-54A0A075B5W5 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ighv1-54A0A075B5W5 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ighv1-54A0A075B5W5 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.99■□□□□ 0.95
Ighv1-54A0A075B5W5 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ighv1-54A0A075B5W5 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Ighv1-54A0A075B5W5 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ighv1-54A0A075B5W5 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ighv1-54A0A075B5W5 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ighv1-54A0A075B5W5 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ighv1-54A0A075B5W5 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ighv1-54A0A075B5W5 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ighv1-54A0A075B5W5 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ighv1-54A0A075B5W5 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Ighv1-54A0A075B5W5 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.95■□□□□ 0.94
Ighv1-54A0A075B5W5 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ighv1-54A0A075B5W5 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.95■□□□□ 0.94
Ighv1-54A0A075B5W5 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Ighv1-54A0A075B5W5 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ighv1-54A0A075B5W5 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Ighv1-54A0A075B5W5 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ighv1-54A0A075B5W5 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ighv1-54A0A075B5W5 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ighv1-54A0A075B5W5 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Ighv1-54A0A075B5W5 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Ighv1-54A0A075B5W5 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Ighv1-54A0A075B5W5 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ighv1-54A0A075B5W5 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.91■□□□□ 0.94
Ighv1-54A0A075B5W5 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ighv1-54A0A075B5W5 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.91■□□□□ 0.94
Ighv1-54A0A075B5W5 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.91■□□□□ 0.94
Ighv1-54A0A075B5W5 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.91■□□□□ 0.94
Ighv1-54A0A075B5W5 Gm37136-201ENSMUST00000194368 194 ntBASIC20.9■□□□□ 0.94
Ighv1-54A0A075B5W5 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.9■□□□□ 0.94
Ighv1-54A0A075B5W5 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ighv1-54A0A075B5W5 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.89■□□□□ 0.93
Ighv1-54A0A075B5W5 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ighv1-54A0A075B5W5 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.88■□□□□ 0.93
Ighv1-54A0A075B5W5 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.88■□□□□ 0.93
Ighv1-54A0A075B5W5 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Ighv1-54A0A075B5W5 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ighv1-54A0A075B5W5 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ighv1-54A0A075B5W5 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.87■□□□□ 0.93
Ighv1-54A0A075B5W5 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms