Protein–RNA interactions for Protein: A0A075B5L7

Igkv4-80, Immunoglobulin kappa variable 4-80 (Fragment), mousemouse

Predictions only

Length 116 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-80A0A075B5L7 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Igkv4-80A0A075B5L7 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Igkv4-80A0A075B5L7 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Igkv4-80A0A075B5L7 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Igkv4-80A0A075B5L7 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Igkv4-80A0A075B5L7 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Igkv4-80A0A075B5L7 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Igkv4-80A0A075B5L7 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Igkv4-80A0A075B5L7 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Igkv4-80A0A075B5L7 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Igkv4-80A0A075B5L7 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Igkv4-80A0A075B5L7 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Igkv4-80A0A075B5L7 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Igkv4-80A0A075B5L7 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Igkv4-80A0A075B5L7 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Igkv4-80A0A075B5L7 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Igkv4-80A0A075B5L7 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Igkv4-80A0A075B5L7 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Igkv4-80A0A075B5L7 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.18■□□□□ 0.82
Igkv4-80A0A075B5L7 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Igkv4-80A0A075B5L7 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Igkv4-80A0A075B5L7 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Igkv4-80A0A075B5L7 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Igkv4-80A0A075B5L7 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Igkv4-80A0A075B5L7 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Igkv4-80A0A075B5L7 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Igkv4-80A0A075B5L7 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Igkv4-80A0A075B5L7 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Igkv4-80A0A075B5L7 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Igkv4-80A0A075B5L7 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Igkv4-80A0A075B5L7 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.14■□□□□ 0.81
Igkv4-80A0A075B5L7 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Igkv4-80A0A075B5L7 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Igkv4-80A0A075B5L7 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Igkv4-80A0A075B5L7 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Igkv4-80A0A075B5L7 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Igkv4-80A0A075B5L7 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Igkv4-80A0A075B5L7 Particl-201ENSMUST00000205370 1560 ntBASIC20.12■□□□□ 0.81
Igkv4-80A0A075B5L7 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Igkv4-80A0A075B5L7 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Igkv4-80A0A075B5L7 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
Igkv4-80A0A075B5L7 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.11■□□□□ 0.81
Igkv4-80A0A075B5L7 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Igkv4-80A0A075B5L7 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Igkv4-80A0A075B5L7 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Igkv4-80A0A075B5L7 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Igkv4-80A0A075B5L7 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Igkv4-80A0A075B5L7 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.1■□□□□ 0.81
Igkv4-80A0A075B5L7 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.1■□□□□ 0.81
Igkv4-80A0A075B5L7 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.1■□□□□ 0.81
Igkv4-80A0A075B5L7 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.1■□□□□ 0.81
Igkv4-80A0A075B5L7 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Igkv4-80A0A075B5L7 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Igkv4-80A0A075B5L7 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.09■□□□□ 0.81
Igkv4-80A0A075B5L7 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Igkv4-80A0A075B5L7 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Igkv4-80A0A075B5L7 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Igkv4-80A0A075B5L7 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Igkv4-80A0A075B5L7 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Igkv4-80A0A075B5L7 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Igkv4-80A0A075B5L7 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Igkv4-80A0A075B5L7 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Igkv4-80A0A075B5L7 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.05■□□□□ 0.8
Igkv4-80A0A075B5L7 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Igkv4-80A0A075B5L7 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Igkv4-80A0A075B5L7 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Igkv4-80A0A075B5L7 Gm7432-201ENSMUST00000210343 879 ntBASIC20.04■□□□□ 0.8
Igkv4-80A0A075B5L7 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.04■□□□□ 0.8
Igkv4-80A0A075B5L7 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Igkv4-80A0A075B5L7 Gm37136-201ENSMUST00000194368 194 ntBASIC20.03■□□□□ 0.8
Igkv4-80A0A075B5L7 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Igkv4-80A0A075B5L7 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Igkv4-80A0A075B5L7 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Igkv4-80A0A075B5L7 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Igkv4-80A0A075B5L7 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Igkv4-80A0A075B5L7 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Igkv4-80A0A075B5L7 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Igkv4-80A0A075B5L7 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Igkv4-80A0A075B5L7 Gm14121-201ENSMUST00000121441 1380 ntBASIC20■□□□□ 0.79
Igkv4-80A0A075B5L7 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Igkv4-80A0A075B5L7 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Igkv4-80A0A075B5L7 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Igkv4-80A0A075B5L7 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Igkv4-80A0A075B5L7 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Igkv4-80A0A075B5L7 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Igkv4-80A0A075B5L7 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Igkv4-80A0A075B5L7 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.98■□□□□ 0.79
Igkv4-80A0A075B5L7 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Igkv4-80A0A075B5L7 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.98■□□□□ 0.79
Igkv4-80A0A075B5L7 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.98■□□□□ 0.79
Igkv4-80A0A075B5L7 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Igkv4-80A0A075B5L7 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.97■□□□□ 0.79
Igkv4-80A0A075B5L7 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Igkv4-80A0A075B5L7 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Igkv4-80A0A075B5L7 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Igkv4-80A0A075B5L7 Gm11599-201ENSMUST00000118720 878 ntBASIC19.96■□□□□ 0.79
Igkv4-80A0A075B5L7 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Igkv4-80A0A075B5L7 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.95■□□□□ 0.78
Igkv4-80A0A075B5L7 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Igkv4-80A0A075B5L7 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms