Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.81■□□□□ 0.44
Trim43aQ3TL54 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim43aQ3TL54 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim43aQ3TL54 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.81■□□□□ 0.44
Trim43aQ3TL54 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim43aQ3TL54 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim43aQ3TL54 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.81■□□□□ 0.44
Trim43aQ3TL54 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim43aQ3TL54 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim43aQ3TL54 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim43aQ3TL54 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trim43aQ3TL54 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim43aQ3TL54 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Trim43aQ3TL54 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim43aQ3TL54 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim43aQ3TL54 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim43aQ3TL54 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.8■□□□□ 0.44
Trim43aQ3TL54 Gm12896-201ENSMUST00000118430 226 ntBASIC17.8■□□□□ 0.44
Trim43aQ3TL54 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim43aQ3TL54 Gm4974-201ENSMUST00000209974 875 ntBASIC17.8■□□□□ 0.44
Trim43aQ3TL54 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trim43aQ3TL54 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.8■□□□□ 0.44
Trim43aQ3TL54 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim43aQ3TL54 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim43aQ3TL54 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim43aQ3TL54 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trim43aQ3TL54 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim43aQ3TL54 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim43aQ3TL54 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim43aQ3TL54 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.79■□□□□ 0.44
Trim43aQ3TL54 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim43aQ3TL54 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.79■□□□□ 0.44
Trim43aQ3TL54 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Trim43aQ3TL54 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trim43aQ3TL54 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim43aQ3TL54 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trim43aQ3TL54 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.79■□□□□ 0.44
Trim43aQ3TL54 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim43aQ3TL54 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim43aQ3TL54 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim43aQ3TL54 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim43aQ3TL54 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trim43aQ3TL54 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim43aQ3TL54 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim43aQ3TL54 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trim43aQ3TL54 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
Trim43aQ3TL54 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
Trim43aQ3TL54 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Trim43aQ3TL54 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim43aQ3TL54 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim43aQ3TL54 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim43aQ3TL54 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Trim43aQ3TL54 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Trim43aQ3TL54 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trim43aQ3TL54 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.78■□□□□ 0.44
Trim43aQ3TL54 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim43aQ3TL54 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Trim43aQ3TL54 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim43aQ3TL54 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim43aQ3TL54 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim43aQ3TL54 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Trim43aQ3TL54 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim43aQ3TL54 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Trim43aQ3TL54 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trim43aQ3TL54 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim43aQ3TL54 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim43aQ3TL54 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim43aQ3TL54 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trim43aQ3TL54 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim43aQ3TL54 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim43aQ3TL54 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trim43aQ3TL54 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim43aQ3TL54 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim43aQ3TL54 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Trim43aQ3TL54 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.77■□□□□ 0.44
Trim43aQ3TL54 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Trim43aQ3TL54 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trim43aQ3TL54 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim43aQ3TL54 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim43aQ3TL54 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim43aQ3TL54 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim43aQ3TL54 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim43aQ3TL54 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trim43aQ3TL54 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trim43aQ3TL54 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trim43aQ3TL54 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trim43aQ3TL54 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.77■□□□□ 0.44
Trim43aQ3TL54 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim43aQ3TL54 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim43aQ3TL54 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim43aQ3TL54 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trim43aQ3TL54 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trim43aQ3TL54 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.77■□□□□ 0.43
Trim43aQ3TL54 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trim43aQ3TL54 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Trim43aQ3TL54 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trim43aQ3TL54 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trim43aQ3TL54 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trim43aQ3TL54 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.76■□□□□ 0.43
Trim43aQ3TL54 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 114.5 ms