Protein–RNA interactions for Protein: Q3ULM6

Uspl1, SUMO-specific isopeptidase USPL1, mousemouse

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uspl1Q3ULM6 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Uspl1Q3ULM6 Gm45244-201ENSMUST00000211328 2200 ntBASIC21.7■■□□□ 1.06
Uspl1Q3ULM6 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Uspl1Q3ULM6 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Uspl1Q3ULM6 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Uspl1Q3ULM6 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC21.7■■□□□ 1.06
Uspl1Q3ULM6 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Uspl1Q3ULM6 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC21.7■■□□□ 1.06
Uspl1Q3ULM6 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Uspl1Q3ULM6 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Uspl1Q3ULM6 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Uspl1Q3ULM6 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Uspl1Q3ULM6 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Uspl1Q3ULM6 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Uspl1Q3ULM6 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC21.69■■□□□ 1.06
Uspl1Q3ULM6 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Uspl1Q3ULM6 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC21.69■■□□□ 1.06
Uspl1Q3ULM6 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Uspl1Q3ULM6 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Uspl1Q3ULM6 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Uspl1Q3ULM6 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Uspl1Q3ULM6 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Uspl1Q3ULM6 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
Uspl1Q3ULM6 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Uspl1Q3ULM6 AC122351.1-201ENSMUST00000220467 126 ntBASIC21.69■■□□□ 1.06
Uspl1Q3ULM6 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Uspl1Q3ULM6 Gm8258-201ENSMUST00000055593 1449 ntBASIC21.69■■□□□ 1.06
Uspl1Q3ULM6 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Uspl1Q3ULM6 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Uspl1Q3ULM6 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Uspl1Q3ULM6 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Uspl1Q3ULM6 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Uspl1Q3ULM6 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Uspl1Q3ULM6 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
Uspl1Q3ULM6 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Uspl1Q3ULM6 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Uspl1Q3ULM6 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC21.68■■□□□ 1.06
Uspl1Q3ULM6 Gm23634-201ENSMUST00000175071 91 ntBASIC21.68■■□□□ 1.06
Uspl1Q3ULM6 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC21.68■■□□□ 1.06
Uspl1Q3ULM6 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Uspl1Q3ULM6 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Uspl1Q3ULM6 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Uspl1Q3ULM6 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Uspl1Q3ULM6 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC21.68■■□□□ 1.06
Uspl1Q3ULM6 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Uspl1Q3ULM6 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Uspl1Q3ULM6 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Uspl1Q3ULM6 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Uspl1Q3ULM6 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Uspl1Q3ULM6 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
Uspl1Q3ULM6 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Uspl1Q3ULM6 Cxcl14-202ENSMUST00000224801 1467 ntBASIC21.67■■□□□ 1.06
Uspl1Q3ULM6 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
Uspl1Q3ULM6 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Uspl1Q3ULM6 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Uspl1Q3ULM6 Gm5587-201ENSMUST00000206270 674 ntBASIC21.67■■□□□ 1.06
Uspl1Q3ULM6 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
Uspl1Q3ULM6 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC21.67■■□□□ 1.06
Uspl1Q3ULM6 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Uspl1Q3ULM6 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Uspl1Q3ULM6 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Uspl1Q3ULM6 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Uspl1Q3ULM6 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Uspl1Q3ULM6 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Uspl1Q3ULM6 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Uspl1Q3ULM6 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Uspl1Q3ULM6 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Uspl1Q3ULM6 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC21.67■■□□□ 1.06
Uspl1Q3ULM6 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Uspl1Q3ULM6 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Uspl1Q3ULM6 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC21.66■■□□□ 1.06
Uspl1Q3ULM6 Gm9013-201ENSMUST00000132939 882 ntBASIC21.66■■□□□ 1.06
Uspl1Q3ULM6 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Uspl1Q3ULM6 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC21.66■■□□□ 1.06
Uspl1Q3ULM6 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC21.66■■□□□ 1.06
Uspl1Q3ULM6 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Uspl1Q3ULM6 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC21.66■■□□□ 1.06
Uspl1Q3ULM6 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Uspl1Q3ULM6 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Uspl1Q3ULM6 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Uspl1Q3ULM6 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Uspl1Q3ULM6 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Uspl1Q3ULM6 Slc35b2-202ENSMUST00000223987 1766 ntBASIC21.66■■□□□ 1.06
Uspl1Q3ULM6 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Uspl1Q3ULM6 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Uspl1Q3ULM6 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Uspl1Q3ULM6 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Uspl1Q3ULM6 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Uspl1Q3ULM6 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Uspl1Q3ULM6 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Uspl1Q3ULM6 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Uspl1Q3ULM6 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Uspl1Q3ULM6 Gm6345-202ENSMUST00000180900 204 ntBASIC21.65■■□□□ 1.06
Uspl1Q3ULM6 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC21.65■■□□□ 1.06
Uspl1Q3ULM6 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Uspl1Q3ULM6 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Uspl1Q3ULM6 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Uspl1Q3ULM6 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Uspl1Q3ULM6 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Uspl1Q3ULM6 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms