Protein–RNA interactions for Protein: Q3ULM6

Uspl1, SUMO-specific isopeptidase USPL1, mousemouse

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uspl1Q3ULM6 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Uspl1Q3ULM6 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Uspl1Q3ULM6 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC21.76■■□□□ 1.07
Uspl1Q3ULM6 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Uspl1Q3ULM6 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Uspl1Q3ULM6 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Uspl1Q3ULM6 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Uspl1Q3ULM6 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Uspl1Q3ULM6 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC21.75■■□□□ 1.07
Uspl1Q3ULM6 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Uspl1Q3ULM6 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Uspl1Q3ULM6 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Uspl1Q3ULM6 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Uspl1Q3ULM6 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Uspl1Q3ULM6 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Uspl1Q3ULM6 Gm11355-201ENSMUST00000121120 306 ntBASIC21.75■■□□□ 1.07
Uspl1Q3ULM6 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Uspl1Q3ULM6 Gm18421-201ENSMUST00000204122 625 ntBASIC21.75■■□□□ 1.07
Uspl1Q3ULM6 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Uspl1Q3ULM6 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Uspl1Q3ULM6 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Uspl1Q3ULM6 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Uspl1Q3ULM6 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Uspl1Q3ULM6 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Uspl1Q3ULM6 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Uspl1Q3ULM6 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Uspl1Q3ULM6 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Uspl1Q3ULM6 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC21.74■■□□□ 1.07
Uspl1Q3ULM6 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Uspl1Q3ULM6 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Uspl1Q3ULM6 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Uspl1Q3ULM6 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Uspl1Q3ULM6 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Uspl1Q3ULM6 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Uspl1Q3ULM6 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Uspl1Q3ULM6 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Uspl1Q3ULM6 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Uspl1Q3ULM6 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Uspl1Q3ULM6 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Uspl1Q3ULM6 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Uspl1Q3ULM6 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Uspl1Q3ULM6 Gm45774-201ENSMUST00000211992 2665 ntBASIC21.73■■□□□ 1.07
Uspl1Q3ULM6 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Uspl1Q3ULM6 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC21.73■■□□□ 1.07
Uspl1Q3ULM6 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Uspl1Q3ULM6 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Uspl1Q3ULM6 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Uspl1Q3ULM6 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Uspl1Q3ULM6 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Uspl1Q3ULM6 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Uspl1Q3ULM6 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
Uspl1Q3ULM6 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
Uspl1Q3ULM6 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Uspl1Q3ULM6 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Uspl1Q3ULM6 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC21.73■■□□□ 1.07
Uspl1Q3ULM6 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Uspl1Q3ULM6 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Uspl1Q3ULM6 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Uspl1Q3ULM6 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Uspl1Q3ULM6 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Uspl1Q3ULM6 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Uspl1Q3ULM6 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Uspl1Q3ULM6 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Uspl1Q3ULM6 Gm11860-201ENSMUST00000122346 1010 ntBASIC21.72■■□□□ 1.07
Uspl1Q3ULM6 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Uspl1Q3ULM6 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Uspl1Q3ULM6 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Uspl1Q3ULM6 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Uspl1Q3ULM6 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Uspl1Q3ULM6 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Uspl1Q3ULM6 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Uspl1Q3ULM6 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Uspl1Q3ULM6 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Uspl1Q3ULM6 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Uspl1Q3ULM6 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Uspl1Q3ULM6 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Uspl1Q3ULM6 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Uspl1Q3ULM6 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Uspl1Q3ULM6 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Uspl1Q3ULM6 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Uspl1Q3ULM6 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC21.71■■□□□ 1.07
Uspl1Q3ULM6 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Uspl1Q3ULM6 Gm26596-201ENSMUST00000180464 2655 ntBASIC21.71■■□□□ 1.07
Uspl1Q3ULM6 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Uspl1Q3ULM6 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Uspl1Q3ULM6 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC21.71■■□□□ 1.07
Uspl1Q3ULM6 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC21.71■■□□□ 1.07
Uspl1Q3ULM6 Gm29707-201ENSMUST00000196325 491 ntBASIC21.71■■□□□ 1.07
Uspl1Q3ULM6 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Uspl1Q3ULM6 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Uspl1Q3ULM6 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Uspl1Q3ULM6 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC21.71■■□□□ 1.07
Uspl1Q3ULM6 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Uspl1Q3ULM6 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Uspl1Q3ULM6 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Uspl1Q3ULM6 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Uspl1Q3ULM6 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Uspl1Q3ULM6 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Uspl1Q3ULM6 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Uspl1Q3ULM6 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms