Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Gm25867-201ENSMUST00000158254 103 ntBASIC-2.96□□□□□ -2.88
Ddx28Q9CWT6 Mir1906-1-201ENSMUST00000122586 80 ntBASIC-3□□□□□ -2.89
Ddx28Q9CWT6 Mir1906-2-201ENSMUST00000122610 80 ntBASIC-3□□□□□ -2.89
Ddx28Q9CWT6 Gm22550-201ENSMUST00000179774 107 ntBASIC-3.01□□□□□ -2.89
Ddx28Q9CWT6 Gm22060-201ENSMUST00000082558 107 ntBASIC-3.01□□□□□ -2.89
Ddx28Q9CWT6 Mir2136-201ENSMUST00000158781 75 ntBASIC-3.04□□□□□ -2.9
Ddx28Q9CWT6 Gm26306-201ENSMUST00000157773 119 ntBASIC-3.05□□□□□ -2.9
Ddx28Q9CWT6 Gm26008-201ENSMUST00000158797 99 ntBASIC-3.05□□□□□ -2.9
Ddx28Q9CWT6 Gm26259-201ENSMUST00000104778 97 ntBASIC-3.08□□□□□ -2.9
Ddx28Q9CWT6 Mir7681-201ENSMUST00000184834 72 ntBASIC-3.09□□□□□ -2.9
Ddx28Q9CWT6 Mir1912-201ENSMUST00000175298 87 ntBASIC-3.1□□□□□ -2.91
Ddx28Q9CWT6 Gm23676-201ENSMUST00000157314 105 ntBASIC-3.19□□□□□ -2.92
Ddx28Q9CWT6 Gm44303-201ENSMUST00000196348 83 ntBASIC-3.22□□□□□ -2.92
Ddx28Q9CWT6 Gm25132-201ENSMUST00000082652 107 ntBASIC-3.22□□□□□ -2.92
Ddx28Q9CWT6 Mir669m-2-201ENSMUST00000158355 98 ntBASIC-3.23□□□□□ -2.93
Ddx28Q9CWT6 Gm24194-201ENSMUST00000116805 90 ntBASIC-3.25□□□□□ -2.93
Ddx28Q9CWT6 Gm27671-201ENSMUST00000183739 66 ntBASIC-3.34□□□□□ -2.94
Ddx28Q9CWT6 n-R5s155-201ENSMUST00000122531 113 ntBASIC-3.37□□□□□ -2.95
Ddx28Q9CWT6 n-R5s218-201ENSMUST00000122583 109 ntBASIC-3.43□□□□□ -2.96
Ddx28Q9CWT6 Gm25521-201ENSMUST00000158393 108 ntBASIC-3.43□□□□□ -2.96
Ddx28Q9CWT6 Gm25254-201ENSMUST00000157239 104 ntBASIC-3.49□□□□□ -2.97
Ddx28Q9CWT6 Gm23210-201ENSMUST00000158668 98 ntBASIC-3.55□□□□□ -2.98
Ddx28Q9CWT6 Gm20473-201ENSMUST00000173064 112 ntBASIC-3.66□□□□□ -3
Ddx28Q9CWT6 Gm25049-201ENSMUST00000158597 73 ntBASIC-3.69□□□□□ -3
Ddx28Q9CWT6 Gm24531-201ENSMUST00000157945 100 ntBASIC-3.88□□□□□ -3.03
Ddx28Q9CWT6 Gm25039-201ENSMUST00000082933 107 ntBASIC-4.04□□□□□ -3.06
Ddx28Q9CWT6 n-R5s214-201ENSMUST00000122494 121 ntBASIC-4.16□□□□□ -3.08
Ddx28Q9CWT6 Gm22593-201ENSMUST00000104245 109 ntBASIC-4.23□□□□□ -3.09
Ddx28Q9CWT6 Gm23248-201ENSMUST00000083367 108 ntBASIC-4.29□□□□□ -3.1
Ddx28Q9CWT6 AC160976.1-201ENSMUST00000215092 148 ntBASIC-4.38□□□□□ -3.11
Ddx28Q9CWT6 Gm23125-201ENSMUST00000157651 106 ntBASIC-4.85□□□□□ -3.19
Ddx28Q9CWT6 Gm25886-201ENSMUST00000157780 114 ntBASIC-4.91□□□□□ -3.2
Retrieved 32 of 76,532 protein–RNA pairs in 212.2 ms