Protein–RNA interactions for Protein: Q3U319

Rnf40, E3 ubiquitin-protein ligase BRE1B, mousemouse

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40Q3U319 Gm27935-201ENSMUST00000183894 79 ntBASIC-1.7□□□□□ -2.68
Rnf40Q3U319 Traj29-201ENSMUST00000103712 60 ntAPPRIS P1 BASIC-1.72□□□□□ -2.68
Rnf40Q3U319 Mir7218-201ENSMUST00000200050 59 ntBASIC-1.72□□□□□ -2.68
Rnf40Q3U319 Mir6395-201ENSMUST00000183885 91 ntBASIC-1.76□□□□□ -2.69
Rnf40Q3U319 Gm23248-201ENSMUST00000083367 108 ntBASIC-1.79□□□□□ -2.7
Rnf40Q3U319 Gm26231-201ENSMUST00000175218 67 ntBASIC-1.85□□□□□ -2.71
Rnf40Q3U319 Mir485-201ENSMUST00000093620 73 ntBASIC-1.85□□□□□ -2.71
Rnf40Q3U319 Gm22385-201ENSMUST00000158189 101 ntBASIC-1.87□□□□□ -2.71
Rnf40Q3U319 Mir154-201ENSMUST00000083514 66 ntBASIC-1.88□□□□□ -2.71
Rnf40Q3U319 Gm44377-201ENSMUST00000199039 87 ntBASIC-1.95□□□□□ -2.72
Rnf40Q3U319 Gm22566-201ENSMUST00000175541 85 ntBASIC-1.96□□□□□ -2.72
Rnf40Q3U319 Gm23751-201ENSMUST00000157583 136 ntBASIC-1.99□□□□□ -2.73
Rnf40Q3U319 Gm44351-201ENSMUST00000200090 95 ntBASIC-2.04□□□□□ -2.74
Rnf40Q3U319 Gm22183-201ENSMUST00000175420 73 ntBASIC-2.11□□□□□ -2.75
Rnf40Q3U319 Gm23566-201ENSMUST00000174907 108 ntBASIC-2.12□□□□□ -2.75
Rnf40Q3U319 Gm25905-201ENSMUST00000158490 101 ntBASIC-2.17□□□□□ -2.76
Rnf40Q3U319 Mir467e-201ENSMUST00000103760 87 ntBASIC-2.19□□□□□ -2.76
Rnf40Q3U319 Gm26307-201ENSMUST00000157767 126 ntBASIC-2.19□□□□□ -2.76
Rnf40Q3U319 Gm25039-201ENSMUST00000082933 107 ntBASIC-2.21□□□□□ -2.76
Rnf40Q3U319 Gm23637-201ENSMUST00000175075 94 ntBASIC-2.25□□□□□ -2.77
Rnf40Q3U319 Gm22402-201ENSMUST00000174920 110 ntBASIC-2.27□□□□□ -2.77
Rnf40Q3U319 Gm24538-201ENSMUST00000082612 107 ntBASIC-2.3□□□□□ -2.78
Rnf40Q3U319 Gm27995-201ENSMUST00000184402 100 ntBASIC-2.32□□□□□ -2.78
Rnf40Q3U319 Gm23210-201ENSMUST00000158668 98 ntBASIC-2.34□□□□□ -2.78
Rnf40Q3U319 Mir335-201ENSMUST00000083567 98 ntBASIC-2.41□□□□□ -2.8
Rnf40Q3U319 Gm23676-201ENSMUST00000157314 105 ntBASIC-2.56□□□□□ -2.82
Rnf40Q3U319 Mir351-201ENSMUST00000083569 99 ntBASIC-2.57□□□□□ -2.82
Rnf40Q3U319 Gm25297-201ENSMUST00000175490 67 ntBASIC-2.59□□□□□ -2.82
Rnf40Q3U319 Mir2136-201ENSMUST00000158781 75 ntBASIC-2.74□□□□□ -2.85
Rnf40Q3U319 n-R5s155-201ENSMUST00000122531 113 ntBASIC-2.77□□□□□ -2.85
Rnf40Q3U319 n-R5s218-201ENSMUST00000122583 109 ntBASIC-2.81□□□□□ -2.86
Rnf40Q3U319 n-R5s214-201ENSMUST00000122494 121 ntBASIC-3.19□□□□□ -2.92
Retrieved 32 of 76,532 protein–RNA pairs in 6.1 ms