Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm24806-201ENSMUST00000117036 90 ntBASIC-0.78□□□□□ -2.53
Col17a1Q07563 Gm22430-201ENSMUST00000158546 107 ntBASIC-0.79□□□□□ -2.54
Col17a1Q07563 Traj33-201ENSMUST00000103708 57 ntAPPRIS P1 BASIC-0.8□□□□□ -2.54
Col17a1Q07563 Gm22566-201ENSMUST00000175541 85 ntBASIC-0.8□□□□□ -2.54
Col17a1Q07563 Mir466o-201ENSMUST00000104832 84 ntBASIC-0.81□□□□□ -2.54
Col17a1Q07563 Mir470-201ENSMUST00000093565 75 ntBASIC-0.84□□□□□ -2.54
Col17a1Q07563 Gm22385-201ENSMUST00000158189 101 ntBASIC-0.85□□□□□ -2.55
Col17a1Q07563 Mir6395-201ENSMUST00000183885 91 ntBASIC-0.86□□□□□ -2.55
Col17a1Q07563 Gm26231-201ENSMUST00000175218 67 ntBASIC-0.88□□□□□ -2.55
Col17a1Q07563 Mir154-201ENSMUST00000083514 66 ntBASIC-0.92□□□□□ -2.56
Col17a1Q07563 Gm23751-201ENSMUST00000157583 136 ntBASIC-0.93□□□□□ -2.56
Col17a1Q07563 Gm44377-201ENSMUST00000199039 87 ntBASIC-0.93□□□□□ -2.56
Col17a1Q07563 Gm25039-201ENSMUST00000082933 107 ntBASIC-0.95□□□□□ -2.56
Col17a1Q07563 Mir485-201ENSMUST00000093620 73 ntBASIC-1.01□□□□□ -2.57
Col17a1Q07563 Gm44351-201ENSMUST00000200090 95 ntBASIC-1.03□□□□□ -2.57
Col17a1Q07563 n-R5s155-201ENSMUST00000122531 113 ntBASIC-1.05□□□□□ -2.58
Col17a1Q07563 Gm26307-201ENSMUST00000157767 126 ntBASIC-1.05□□□□□ -2.58
Col17a1Q07563 Gm23637-201ENSMUST00000175075 94 ntBASIC-1.05□□□□□ -2.58
Col17a1Q07563 Gm23566-201ENSMUST00000174907 108 ntBASIC-1.06□□□□□ -2.58
Col17a1Q07563 Gm22183-201ENSMUST00000175420 73 ntBASIC-1.08□□□□□ -2.58
Col17a1Q07563 Mir467e-201ENSMUST00000103760 87 ntBASIC-1.09□□□□□ -2.58
Col17a1Q07563 Gm23210-201ENSMUST00000158668 98 ntBASIC-1.09□□□□□ -2.58
Col17a1Q07563 Mir335-201ENSMUST00000083567 98 ntBASIC-1.09□□□□□ -2.58
Col17a1Q07563 Gm24538-201ENSMUST00000082612 107 ntBASIC-1.1□□□□□ -2.59
Col17a1Q07563 Gm22402-201ENSMUST00000174920 110 ntBASIC-1.11□□□□□ -2.59
Col17a1Q07563 Mir351-201ENSMUST00000083569 99 ntBASIC-1.15□□□□□ -2.59
Col17a1Q07563 Gm25297-201ENSMUST00000175490 67 ntBASIC-1.23□□□□□ -2.61
Col17a1Q07563 Gm27995-201ENSMUST00000184402 100 ntBASIC-1.24□□□□□ -2.61
Col17a1Q07563 Gm23676-201ENSMUST00000157314 105 ntBASIC-1.35□□□□□ -2.63
Col17a1Q07563 Mir2136-201ENSMUST00000158781 75 ntBASIC-1.37□□□□□ -2.63
Col17a1Q07563 n-R5s218-201ENSMUST00000122583 109 ntBASIC-1.51□□□□□ -2.65
Col17a1Q07563 n-R5s214-201ENSMUST00000122494 121 ntBASIC-1.59□□□□□ -2.66
Retrieved 32 of 76,532 protein–RNA pairs in 1120.5 ms