Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Gm25905-201ENSMUST00000158490 101 ntBASIC-1.54□□□□□ -2.66
Col6a1Q04857 Gm27882-201ENSMUST00000184904 74 ntBASIC-1.54□□□□□ -2.66
Col6a1Q04857 Gm44351-201ENSMUST00000200090 95 ntBASIC-1.55□□□□□ -2.66
Col6a1Q04857 Gm44377-201ENSMUST00000199039 87 ntBASIC-1.56□□□□□ -2.66
Col6a1Q04857 Mir467e-201ENSMUST00000103760 87 ntBASIC-1.58□□□□□ -2.66
Col6a1Q04857 Gm26231-201ENSMUST00000175218 67 ntBASIC-1.58□□□□□ -2.66
Col6a1Q04857 Mir6395-201ENSMUST00000183885 91 ntBASIC-1.59□□□□□ -2.66
Col6a1Q04857 Gm23125-201ENSMUST00000157651 106 ntBASIC-1.6□□□□□ -2.67
Col6a1Q04857 Gm26008-201ENSMUST00000158797 99 ntBASIC-1.62□□□□□ -2.67
Col6a1Q04857 Gm22183-201ENSMUST00000175420 73 ntBASIC-1.62□□□□□ -2.67
Col6a1Q04857 Gm23566-201ENSMUST00000174907 108 ntBASIC-1.66□□□□□ -2.68
Col6a1Q04857 Gm22402-201ENSMUST00000174920 110 ntBASIC-1.66□□□□□ -2.68
Col6a1Q04857 Mir1906-1-201ENSMUST00000122586 80 ntBASIC-1.7□□□□□ -2.68
Col6a1Q04857 Mir1906-2-201ENSMUST00000122610 80 ntBASIC-1.7□□□□□ -2.68
Col6a1Q04857 Gm23637-201ENSMUST00000175075 94 ntBASIC-1.7□□□□□ -2.68
Col6a1Q04857 Gm25254-201ENSMUST00000157239 104 ntBASIC-1.72□□□□□ -2.68
Col6a1Q04857 Mir154-201ENSMUST00000083514 66 ntBASIC-1.72□□□□□ -2.68
Col6a1Q04857 Gm27995-201ENSMUST00000184402 100 ntBASIC-1.74□□□□□ -2.69
Col6a1Q04857 Gm26307-201ENSMUST00000157767 126 ntBASIC-1.75□□□□□ -2.69
Col6a1Q04857 Gm27671-201ENSMUST00000183739 66 ntBASIC-1.81□□□□□ -2.7
Col6a1Q04857 Gm24538-201ENSMUST00000082612 107 ntBASIC-1.88□□□□□ -2.71
Col6a1Q04857 Mir335-201ENSMUST00000083567 98 ntBASIC-1.92□□□□□ -2.72
Col6a1Q04857 Mir2136-201ENSMUST00000158781 75 ntBASIC-1.96□□□□□ -2.72
Col6a1Q04857 Gm25297-201ENSMUST00000175490 67 ntBASIC-2.03□□□□□ -2.73
Col6a1Q04857 n-R5s155-201ENSMUST00000122531 113 ntBASIC-2.04□□□□□ -2.74
Col6a1Q04857 Mir351-201ENSMUST00000083569 99 ntBASIC-2.08□□□□□ -2.74
Col6a1Q04857 Gm23210-201ENSMUST00000158668 98 ntBASIC-2.1□□□□□ -2.75
Col6a1Q04857 Gm23676-201ENSMUST00000157314 105 ntBASIC-2.16□□□□□ -2.76
Col6a1Q04857 n-R5s218-201ENSMUST00000122583 109 ntBASIC-2.17□□□□□ -2.76
Col6a1Q04857 Gm23248-201ENSMUST00000083367 108 ntBASIC-2.27□□□□□ -2.77
Col6a1Q04857 Gm25039-201ENSMUST00000082933 107 ntBASIC-2.29□□□□□ -2.78
Col6a1Q04857 n-R5s214-201ENSMUST00000122494 121 ntBASIC-2.55□□□□□ -2.82
Retrieved 32 of 76,532 protein–RNA pairs in 165.5 ms