Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm25524-201ENSMUST00000101821 107 ntBASIC-3.86□□□□□ -3.03
Sdc1P18828 Gm24396-201ENSMUST00000116905 93 ntBASIC-3.87□□□□□ -3.03
Sdc1P18828 Gm25354-201ENSMUST00000179110 105 ntBASIC-3.88□□□□□ -3.03
Sdc1P18828 Gm44303-201ENSMUST00000196348 83 ntBASIC-3.89□□□□□ -3.03
Sdc1P18828 Gm23826-201ENSMUST00000157394 119 ntBASIC-3.93□□□□□ -3.04
Sdc1P18828 Gm23210-201ENSMUST00000158668 98 ntBASIC-3.94□□□□□ -3.04
Sdc1P18828 Gm22067-201ENSMUST00000122790 107 ntBASIC-3.95□□□□□ -3.04
Sdc1P18828 Mir669m-2-201ENSMUST00000158355 98 ntBASIC-3.95□□□□□ -3.04
Sdc1P18828 Gm24194-201ENSMUST00000116805 90 ntBASIC-3.98□□□□□ -3.05
Sdc1P18828 Gm25521-201ENSMUST00000158393 108 ntBASIC-3.99□□□□□ -3.05
Sdc1P18828 Gm44385-201ENSMUST00000198781 81 ntBASIC-4.04□□□□□ -3.06
Sdc1P18828 Gm25254-201ENSMUST00000157239 104 ntBASIC-4.05□□□□□ -3.06
Sdc1P18828 Gm26259-201ENSMUST00000104778 97 ntBASIC-4.07□□□□□ -3.06
Sdc1P18828 Gm25132-201ENSMUST00000082652 107 ntBASIC-4.07□□□□□ -3.06
Sdc1P18828 Gm23237-201ENSMUST00000104639 92 ntBASIC-4.1□□□□□ -3.07
Sdc1P18828 Gm22033-201ENSMUST00000116947 90 ntBASIC-4.31□□□□□ -3.1
Sdc1P18828 Gm20473-201ENSMUST00000173064 112 ntBASIC-4.46□□□□□ -3.12
Sdc1P18828 Gm25049-201ENSMUST00000158597 73 ntBASIC-4.47□□□□□ -3.13
Sdc1P18828 n-R5s214-201ENSMUST00000122494 121 ntBASIC-4.53□□□□□ -3.13
Sdc1P18828 Gm25045-201ENSMUST00000122670 99 ntBASIC-4.53□□□□□ -3.13
Sdc1P18828 Gm25039-201ENSMUST00000082933 107 ntBASIC-4.53□□□□□ -3.13
Sdc1P18828 Gm25950-201ENSMUST00000175331 100 ntBASIC-4.57□□□□□ -3.14
Sdc1P18828 Gm22540-201ENSMUST00000158168 117 ntBASIC-4.59□□□□□ -3.14
Sdc1P18828 Gm23248-201ENSMUST00000083367 108 ntBASIC-4.89□□□□□ -3.19
Sdc1P18828 Gm24531-201ENSMUST00000157945 100 ntBASIC-4.92□□□□□ -3.2
Sdc1P18828 Gm22069-201ENSMUST00000179911 107 ntBASIC-4.95□□□□□ -3.2
Sdc1P18828 Gm22943-201ENSMUST00000158564 76 ntBASIC-5.19□□□□□ -3.24
Sdc1P18828 Gm22593-201ENSMUST00000104245 109 ntBASIC-5.2□□□□□ -3.24
Sdc1P18828 Gm27645-201ENSMUST00000183348 77 ntBASIC-5.61□□□□□ -3.31
Sdc1P18828 Gm23125-201ENSMUST00000157651 106 ntBASIC-5.83□□□□□ -3.34
Sdc1P18828 AC160976.1-201ENSMUST00000215092 148 ntBASIC-5.86□□□□□ -3.35
Sdc1P18828 Gm25886-201ENSMUST00000157780 114 ntBASIC-6.11□□□□□ -3.39
Retrieved 32 of 76,532 protein–RNA pairs in 162.3 ms